Oryzias melastigma (Indian medaka): 112151398
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Entry
112151398 CDS
T07439
Symbol
nrp1a
Name
(RefSeq) neuropilin-1a isoform X1
KO
K06724
neuropilin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112151398 (nrp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oml04090
]
112151398 (nrp1a)
CD molecules [BR:
oml04090
]
Proteins
112151398 (nrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
F5_F8_type_C
DUF3481
MAM
F5_F8_type_C_2
CUB_M02D8_5_3rd
CDCP1_CUB_6
DUF3789
Motif
Other DBs
NCBI-GeneID:
112151398
NCBI-ProteinID:
XP_024136094
Ensembl:
ENSOMEG00000020413
LinkDB
All DBs
Position
LG20:18281374..18358941
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AA seq
931 aa
AA seq
DB search
MFDFIFLGDKTRMHCGLVFILLMGILLVVKASEKDKCGGNIKISTPSYLTSPGYPSSYPA
SQRCTWVITAPGPHQRIFINFNPHFDLEDRECKYDYVEVRDGVDESGQLVGKYCGKIAPS
PVVSSGNQLFIKFVSDYETHGAGFSIRYEIFKTGPECSRNFTSSGGVIKSPGFPEKYPNN
LDCTFMIFAPKMSEIILEFENFDLEPDPTPPVGVFCRYDRLEIWDGFPGVGPYIGRYCGQ
NTPGRIISYTGILALTINSDSAIAKEGFSANFTVIERTVPEDFDCSDPLGMESGEITSDQ
IMASSQYNPSWSPERSRLNYYENAWTPADDTNKEWIQVDLGFLRFVSAIGTQGAISQETQ
KIYYVKAYKVDVSSNGEDWITLKEGSKQKIFQGNTNPTDVAKTKLPKPTLTRFVRIRPVT
WETGIALRFEVYGCKISEYPCSGMLGMVSGLIPDTQITASSHTDRNWVPENARLLTSRTG
WTLLPQPQPFSKEWLQVDLGEEKRVKGLIIQGGMHRENKVFMKKFRLGYSSNGSDWRMVM
DPSGSKPKIFEGNSNYDTPELRTVEPLLTRFIRIYPDRSPPAGMGLRLELLGCEVEAPTL
PPTIPSTTPSDECDDDQASCHSGTGDDYDVTAGGTITPDTTTAEVVATPAFQWFACDFGW
ANKPSFCSWTSEDTGSWWQIQSSGTPTLNTGPNMDHTGGSGNFIYTLATGLQETEVARLV
SPLVTSPDADLCMSFWYHMFGSHIGKLHIKQRKPTDDGPADILLWAVSGHQGNRWREGRV
FVPRNNNPYQVVIEGIVEERRWGDIAVDDIKVLDGLSMQDCKDPDVPTEEDRFNEIIEAV
TDYPDSVQTNQISEAGNMLKQLDPILITIIAMSALGVFLGAICGVVLYCACSHGAMSERN
LSALENYNFELVDGVKLKKDKLNVQNSYSEA
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattttatttttctgggcgacaaaacaaggatgcattgtggattagtttttatc
ctgttaatgggaatcctcctggtggtcaaggcttcggaaaaagataaatgcggaggcaac
atcaaaatctccacccccagctacctcacctcgcccggttaccccagtagttaccccgcc
tcccagaggtgcacctgggtgatcaccgcgcctggtcctcaccagcggatcttcatcaat
ttcaacccgcattttgacctggaggatcgggaatgcaagtatgactacgtggaggtgcga
gacggcgtggacgagagcgggcagctggtggggaagtactgtgggaagatcgcgccgtcc
cctgtcgtctcctcagggaaccagctcttcatcaagtttgtgtccgactatgaaacccat
ggagcgggtttttccatccgatacgagatttttaagaccggtcccgagtgctccaggaac
ttcacctccagcggcggtgtcataaagtcgcccgggttcccggagaaataccccaacaac
ctggactgcactttcatgatctttgccccaaagatgtcggaaatcattttggagtttgag
aatttcgatttggagcccgaccccacgccccctgttggtgtgttctgccgctacgatcgg
ttggagatctgggatggcttccctggagttggcccttacatcggcaggtactgcgggcag
aacactccgggccgaatcatctcctacacgggcattttggccctgacaatcaactccgac
agcgccatcgccaaggagggcttctccgccaacttcaccgtcatcgagaggaccgtcccg
gaggacttcgactgcagcgaccctctgggaatggaatcgggggagatcacatcagaccaa
atcatggcctcttcccagtacaaccccagctggtccccggagcgctctcgcctcaactac
tacgaaaacgcctggacgccggcggacgacaccaacaaggagtggattcaggtggacctc
gggttcctgcggtttgtctcagccatcggtacccaaggagctatttcccaagaaacccag
aagatttactacgtcaaggcctacaaagtagacgtcagctccaacggagaagactggatc
acgttaaaagaaggctccaagcagaagattttccaaggcaacaccaacccaacagacgtt
gccaagacaaagctgcccaaacccacgctgacacgcttcgtacggatccgtcctgttacc
tgggagacggggatcgcgctgcgcttcgaagtgtacggctgtaagatatcagagtatccg
tgttctggcatgctgggaatggtatcaggcttgatccccgacacccagatcaccgcatcg
tcccacaccgacagaaactgggtccccgagaacgcccggctcctcaccagcagaacgggg
tggactctgctgccccagccgcagcccttcagcaaggagtggctgcaggtggatctgggg
gaggagaaacgagtgaaagggttgatcatccagggagggatgcaccgtgagaacaaggtg
ttcatgaagaagttccgcctgggctacagcagcaacggctccgactggaggatggtgatg
gatcccagtgggagcaagccaaagatatttgaaggtaacagcaattacgatactcctgag
ctgaggacggtggagcccctgctgacccgttttatcaggatttatccggataggtcacct
cctgctggaatgggtctacgactcgaactgcttggctgtgaagttgaagctcctacgctc
cctcccaccattccgagcacaaccccatcagacgagtgcgacgacgaccaggcgagctgc
cacagcggcacaggtgatgactacgatgtgacagcaggaggtaccataacaccagacact
actacagctgaagtggttgccaccccagctttccagtggttcgcctgtgactttggctgg
gccaataagccctccttctgcagctggacatctgaggacactggctcttggtggcagatc
cagtccagtggcaccccaacattaaataccggacccaacatggaccacacaggtggatca
gggaatttcatctacaccctagcgactggtcttcaggaaacagaggtggctcgcctggtg
agtcctctggtcacctccccggacgcagacctgtgcatgtccttctggtaccacatgttt
gggtcgcacattggaaagctacacatcaaacaacgcaagccaacagacgacgggccagca
gacatcctgctgtgggctgtcagcggtcaccaaggcaaccgatggcgggagggccgggtc
tttgtgcctcggaacaataatccctatcaggtggtgattgaaggcatcgtggaggaaagg
agatggggagacattgctgtagatgacatcaaggttcttgatggactcagcatgcaagac
tgtaaagatccggatgttcccacggaggaggatagatttaacgaaataattgaggcagtc
acagattatccagactctgtccagaccaatcagatcagtgaagcaggcaacatgctgaag
cagctagaccccatcctaatcaccatcattgccatgtctgccctgggggtcttcctcggg
gccatctgcggagtggttttatactgcgcttgctcacacggcgccatgtcagagaggaac
ttatcggccctggagaactataactttgaattggtggatggtgtcaagctaaagaaagac
aaactcaacgtgcaaaactcatactcggaggcgtga
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