Oryzias melastigma (Indian medaka): 112151722
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Entry
112151722 CDS
T07439
Symbol
ireb2
Name
(RefSeq) iron-responsive element-binding protein 2
KO
K22416
iron-responsive element-binding protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112151722 (ireb2)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112151722 (ireb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
112151722
NCBI-ProteinID:
XP_024136535
Ensembl:
ENSOMEG00000005120
LinkDB
All DBs
Position
LG6:10560326..10577676
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AA seq
986 aa
AA seq
DB search
MALATQIKEHPYSCVIDTLKDGKIKFFNPRKLNDPRYDRLPLTIRVFLEAAIRNCDGFYT
TESDVENILDWQQQQDKTEVPFTPARVLLQDFTGIPAMVDLAAMRDAVAKHGEDPSLINP
KCPTDLIVDHSLQIDFSKCAIQNAPNPGGGESATSPRSVPSRLPSRGGSHCGGQQGSCGK
AACSDPPAPSGARPAAVQQIENTPLLCPFHLKPVSETETAVKNQEMELIRNKERLQFFKW
CSKAFKNVNVVPPDVGAVHQVNLEYLSRVVQVSDGVMYPDSVVGTDSHTTMINGLGILGW
GVGGIESEAVMLGQPVSLTLPQVVGCKLVGSINPLSTSIDIVLGITKHLRQAAIAGRFVE
FFGPGLSQLSAPDRTTIANMCPEYNATVSFFPIDQVTLKHFKKTNFSHEKLELMESYMKA
IKLFRSYEEPCEDPQYSEVIEINLSSMVPHVSGPKRPQDRVAVSNMKADFQSCLDEKVGF
KGFHISKEKQETRVAFLHCGQEYQLVHGSVVIAAVISCTNNCNPSVMLTAGLLAKKAVEA
GLTVKPYIRTSLAPGSGMVTHYLNSSGVLPYFSQLGFQVIGYGCATCVGNTAPLPDAVVD
AIKQGDLVTCGLLSGNRHFEGRLCDCVRANYLASPPLVVAYAIAGTVGIDFEKEPLGLSS
SGKEVYLSDIWPSREEVQQTEEDTVISSVFKDLRGRMEKGNTFWNNITSPDSVVFPWDPK
STYIRSPPFFSKLSKDLPAPQSIENAHALLFLGDKVSTDHISPAGSIARASAAAKYLQSR
RLTPREFNSYGARRGNDAVMTRGTFASIKLLNRFIGKPGPKTLHIPSGQTLDVFEAADRY
QRDGVPLIILAGKEYGSGNSRDWVAKGPFLLGVRAVIAESFEKLHKSQLVGMGIMPLQFL
PGQSADSLELSGKERFSIVLPESLSPSQHLTVKTSKGTSFSVTALFDSQIDVILFQHGGL
LRFVARTFLGSSLQPGAAAAERAPSP
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgctacccaaatcaaagagcacccatactcttgtgtaattgacacgctgaaa
gatggcaagatcaaattcttcaacccgaggaaactcaacgatccgagatacgaccggctg
cctctgaccatccgtgtctttctggaggcagcgatacgcaactgtgatggcttttatacc
acagagagtgatgtggagaacatcttggactggcagcagcagcaggataaaaccgaggtg
cctttcactccggcacgagtccttctgcaggatttcactgggattcctgccatggtggac
ttagcagccatgagggacgctgtggccaaacatggcgaagaccccagtttgattaaccct
aaatgccccacagacctgatcgtagatcactcgttacagatcgatttcagcaaatgtgcc
atacagaatgctccaaaccccggtggaggggaaagtgcgacttctcctcgctccgtaccc
tccaggcttccatccagaggcggctcacattgcggaggccagcaaggctcctgcggcaaa
gcggcctgcagcgatccgccggccccgtcaggagcacgtccagcggcggtccagcagatc
gagaacacgcctcttctctgccccttccacctgaagcccgtctctgaaactgaaacggct
gtgaagaatcaggaaatggaactgataagaaacaaggagaggcttcagttctttaagtgg
tgctccaaagcctttaaaaacgtcaacgtggttcctccagacgtgggtgcggttcatcag
gtcaacttggagtacctgtcgcgggtggtgcaggtcagcgacggtgtgatgtaccccgac
agcgtggtgggaacagactcccacaccaccatgatcaacggcctggggatcctaggatgg
ggggtcggaggaatcgagtcggaagccgtgatgctcggccagcccgtgtctctgaccctc
cctcaggtggtgggctgtaaactggttggctccatcaacccactcagcacatctatagac
atcgtgctcggcatcacaaagcacttgcggcaggctgccatcgctgggaggtttgtggag
ttcttcggacctggactctcccagctgtcggctcctgaccggaccaccatcgccaacatg
tgcccggagtacaacgccaccgtcagcttcttccccatcgaccaagtcacactcaagcac
tttaaaaagacaaatttcagccatgaaaaacttgaattgatggagtcttacatgaaggcg
atcaaacttttccgaagctatgaagaaccttgtgaagaccctcagtactctgaggtgatc
gagatcaacctgagctccatggtgccccacgtcagcggtcccaaaaggcctcaggaccgg
gtggcagtcagcaacatgaaggcagacttccagagctgtctcgacgagaaggtgggcttt
aaaggtttccacatttccaaggagaagcaggagacccgcgtcgccttcctccactgcggt
caggagtaccagctggtgcacggctcggtggtcatcgccgccgtcatcagctgcaccaat
aactgcaatccgtctgtcatgctgactgcaggccttctggccaaaaaggctgtggaagcc
ggcctcactgtcaagccttacatccggaccagtctagctcctggaagtgggatggtcact
cactacctcaacagcagcggcgttctgccttacttcagtcagctggggtttcaggtgatt
ggttatggctgtgccacttgcgttggaaatacggcaccgttaccggacgccgtcgtggac
gccatcaaacagggggatctggtgacctgcggcctgttgtccggcaaccggcactttgaa
ggacgcctgtgtgactgcgtgcgggccaactacctggcctcccctcccctggtggtggct
tacgctatagcgggcactgtgggaatcgactttgagaaggagccgttaggtttgtcttcc
agcgggaaggaggtgtatctaagtgatatctggccgtccagagaggaggtccaacagacg
gaggaggacaccgtcatctcctctgtctttaaggatctcaggggaaggatggagaaaggg
aacacgttttggaacaacattacaagtccagactctgtggttttcccgtgggatcccaag
tccacgtacatccgctctccaccgttcttcagcaagctgagcaaagacctgcctgcccct
cagtccatagagaacgctcacgccttactcttcctcggggacaaagtcagcacggaccac
atctcgccagcgggcagcatcgccagggccagcgccgccgccaagtacctgcagagcagg
cggctgaccccgcgggagtttaattcctatggcgctcgcagaggaaacgacgcggtgatg
accagaggcacgttcgccagcatcaaactcctgaatcggttcatcggaaaaccgggcccg
aagactttgcacattccttcaggccagacgctggatgtctttgaagcggcggatcgctat
cagagagatggcgttcccctgattatcctggcaggaaaggagtacggctccgggaattcc
agggactgggttgccaaagggccttttctgctgggggtgcgtgccgtcatcgccgaaagc
tttgagaagctccacaaatcccagctggtggggatgggcatcatgccgctgcagtttctg
cccggccagagcgccgactcgctggagctcagtgggaaggagcgcttcagcatcgtcctg
ccagaaagcctgagtcccagccagcacctcaccgttaagaccagcaaaggaacgtccttc
tccgtcaccgcactcttcgactctcagatagacgtcatcctcttccagcacggggggctc
ctgcggtttgtcgctcggacttttctcggaagcagcctgcagcctggagctgccgccgcc
gagcgtgctccaagtccataa
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