Oryzias melastigma (Indian medaka): 112154152
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Entry
112154152 CDS
T07439
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04136
Autophagy - other
oml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112154152
04136 Autophagy - other
112154152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154152
03029 Mitochondrial biogenesis [BR:
oml03029
]
112154152
Membrane trafficking [BR:
oml04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112154152
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112154152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
ANAPC4_WD40
CPSF_A
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
112154152
NCBI-ProteinID:
XP_024140638
Ensembl:
ENSOMEG00000005782
LinkDB
All DBs
Position
LG19:complement(2944438..2954831)
Genome browser
AA seq
443 aa
AA seq
DB search
MESQDAPESPGLHRGFICASFNQDTTSLSVGTKTGYRLFSVTAVDKLECIHEGVECPDIY
IVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESI
YIHNIRDMKLLKTLLNTPVNPSGLCALSVNQTNSYLAYPGSATMGEITIYDANSLSTVTL
IQAHDSPLAALTFNASGSKLASASEKGTVIRVFSIPEGQKLFEFRRGMKRYVSISSLSFS
ADAQFLCASSNTETVHIFKLEQHSPSQEEESPTWSTYVGKMFTAASTYLPTHVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGFLYIYNVDPQDGGECVLVQKHRLFE
TSGEQDEPEEEESPEDVCPQPAGQSYAATVALPSTPPSSTTLIGYSEEGGAQKGEVIPEH
ELAEGPICLDDENEFPPVSNQSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggacgcgccggagagccccggactacaccgaggcttcatctgtgcctcg
ttcaaccaggacaccacctccttgtctgtgggcaccaaaactggttaccggctcttctct
gtcacagctgtggacaaactggaatgcatccatgagggagtggaatgtccggacatctac
attgtggagcggctgttctccagcagcttggtggtggtggtcagcctctccatgcccagg
aggatgaatgtttaccactttaagaagggcacagagatctgtaactacagctactctaac
aacatcctctccgtcaggctcaacagacagcggctggtggtgtgtctggaagagtccatc
tacatccataacatcagagacatgaaactgctcaagaccctcctcaacacccccgtcaac
ccatcaggcttgtgtgccctttctgtcaaccagactaactcctacctggcgtaccccggc
agtgccaccatgggggagataaccatctatgatgccaacagcctgagcacggtgactctg
atccaggctcacgacagccctctggcagcactcaccttcaacgcctctggctccaaacta
gccagcgcatcagagaaaggaactgtaatccgagtcttcagcatccctgaaggtcagaag
ctgtttgaatttcggcgagggatgaagagatatgttagcatcagctcgctgtccttcagt
gcagacgctcagttcctgtgcgcctccagcaacacagagaccgtccacatcttcaagctg
gagcagcacagccccagtcaagaggaagaatctccaacctggtcaacctacgttggcaaa
atgttcaccgccgccagcacctacctgcccacccacgtgtcggacatgatgcaccaggac
cgagctttcgccaccgttcgcctcaacatgttcggcctgaagaacatttgtgctcttgct
acaatccagaaacttcccagactgctggtggcgtcctcggacgggttcctttacatctac
aacgtggatccccaggatggaggcgagtgtgtcctcgttcagaaacacagactctttgaa
accagcggagaacaagatgaacctgaagaagaagagagcccagaggacgtctgtccacag
ccagccggtcagtcctacgccgccaccgtggcgctcccatccacgccgccatcgtccacc
acgctcataggctattctgaagagggcggagcccagaagggagaggtcatccctgagcac
gaactggctgaaggccccatttgtctggatgacgaaaacgagtttcctcccgttagcaac
cagagtaactaa
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