Oryzias melastigma (Indian medaka): 112157038
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Entry
112157038 CDS
T07439
Symbol
smc2
Name
(RefSeq) structural maintenance of chromosomes protein 2
KO
K06674
structural maintenance of chromosome 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112157038 (smc2)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
112157038 (smc2)
Condensin II
112157038 (smc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
DUF4763
Motif
Other DBs
NCBI-GeneID:
112157038
NCBI-ProteinID:
XP_024145248
Ensembl:
ENSOMEG00000014982
LinkDB
All DBs
Position
LG1:complement(21977536..21986931)
Genome browser
AA seq
1199 aa
AA seq
DB search
MYIKSIIIEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTHVRAS
NLQDLVYKNGQGGITKATVSITFDNSNKSQSPLGFETHDEITVTRQVVIGGRNKYLINGV
NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGTRMYECKKIS
AQRTIEKKEAKLREIQTILDEEITPTMQKLQEERSSYLEYQKLMREIQHLSRLYVAWLFV
CAEETKAKSAENLKEMQDKIAKMQATMAENESKIQELSAQIQELEKKNDQEVNGELKTLE
MSLASVQREDAKAQSALDLKKQNLKDETKKRKELVKSMEEDKKVLVVKEKEVAKLSEQLQ
ALQVEGQKNSTGLEAAEQHFKAVSAGLSTNEDGEEATLAGQMMACKNDMSKADTEAKQAQ
MTLKHAQAELKTKQAEVKKMDGGYKKDQDTLKAVRSSREKLEAELAKLNYEDGKEESLME
KRRQLSREVAQLKGTFDRLMSRFPSLRFEYKDPERGWDRSKVKGLLANLISVSDVSYATA
LEVVAGGRLYNIVVDTEVTGKKLLEKGELQRRYTIIPLNKISAKTLNDKVISTAKRLVGE
DNVHTALSLVGYESDLRKAMEYVFGSTLVCDTLDNAKKVAFDKQVMTKTVTLGGDIFDPQ
GTLSGGARSQSASILSSLQEVKDVQDSLNEKEAQLQDTERQMSSLKGTAEKYRQLKQQHE
LKLEEEQILQTKLQQSSFHQQQEELERLQKAIDESEATLCLTKEVQKRAEEKYKVLENKM
KNAEAEREKELKAAQQKLNKAKAQADAFNKTLKQKQQESEAVALELEELRREQATYEQQI
QAVDEAMKAIQEQIDSMACTVTQNKEAVRKAQEELTKLKEVIMAQDKEIKGKNSEANKMR
EQNNNIQLKIREEEHNINKHHKDSQDAANKVARMLEEHDWIQSERHFFGQPNSSYDFKVN
NPREAGQRLKKLEETTSKLERNVNKRAMNMLNEAEERYNDLMKKKRIVENDKAKILQTIE
ELDQKKNEALNLAWQKVNKDFGSIFSTLLPGATAKLAPLQGCGVLEGLEFKVALGDTWKE
NLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFRHSQF
VVVSLKDGMFTNANVLFKTKFVDGMSTVTRTALSQSDIPHKGQDKARQKDKRNKQLAAL
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaatccatcattatcgaaggttttaaatcttacgcccagaggaccgaaatc
aacggcttcgacccgcttttcaatgccatcaccggactgaacggcagcggcaagtccaac
attttggactcgatatgtttccttttggggatttctaacctcacacatgttcgagcttca
aacctccaggacttggtttacaagaacggacagggtggcatcactaaagctactgtgtct
attacttttgacaactcaaataaaagccagagtcctctgggatttgaaacccacgatgag
atcactgtaaccagacaggtcgttataggaggcaggaacaaatatctgatcaatggggtc
aatgccaacaacaccagagtgcaggacttgttctgctctgttggcctcaatgttaacaac
ccacatttcctcatcatgcagggaagaataaccaaggttttgaacatgaaaccaccagag
attcttgccatgattgaggaggctgcaggcaccagaatgtacgaatgtaagaagatcagt
gcacagaggacaattgagaagaaagaggccaaactgagagagattcagactattttggat
gaggagattactcctaccatgcagaagctgcaagaggaaagatcctcctatttggaatac
cagaaactgatgcgtgagatccagcacttgtcgcgactttatgtggcctggctgttcgtg
tgcgctgaggagacgaaagcgaagtccgctgaaaatctgaaggaaatgcaagacaagata
gccaagatgcaggccaccatggctgagaatgagagcaaaatccaggagctttctgctcag
attcaagagctggagaagaaaaatgaccaggaggtaaatggagaactaaaaaccttggag
atgtctcttgcgagtgtgcagcgtgaggacgctaaagctcagagcgctctagatttaaag
aagcagaatctgaaagatgaaaccaagaagagaaaggagctagtaaagagcatggaagag
gacaagaaagtgcttgtggtgaaggaaaaagaagtggccaagttgtccgagcagcttcag
gcccttcaggtggaaggacaaaaaaacagcactggactcgaggcagctgagcagcatttc
aaagccgtgtctgcgggtctttctaccaatgaggacggcgaggaagccactttagctggg
cagatgatggcctgcaagaacgacatgagcaaagcagacaccgaggctaagcaggcccaa
atgaccctgaagcatgcccaggcagagctgaagaccaaacaagcggaggtgaagaagatg
gacggcggctacaagaaagatcaggacaccttgaaggccgtcagaagcagccgagagaaa
ctcgaggcagagctggccaaactcaactatgaagatggaaaagaagagagtctgatggaa
aaacgaagacagctttccagggaagtcgctcagcttaaggggacttttgaccggctcatg
tctcgcttccccagcctgcgctttgaatacaaggacccggagcgaggctgggaccgaagc
aaagtgaagggtcttctagcgaatctcataagtgtcagtgatgtttcctacgccaccgca
ctggaggtcgttgcaggcggacggctctacaacattgttgttgacacagaggtgactggt
aagaagctgctggagaaaggagagctgcagcgcaggtacaccatcatccccctcaacaag
atctctgccaagactctgaacgacaaagtgatcagcaccgcaaagcgcctggtgggggag
gacaacgtccacaccgctctgtccctggtcggatacgagtccgaccttcgtaaagccatg
gagtacgtgttcggatcgacgctggtctgtgacactttggacaatgcgaagaaagtagcg
ttcgacaagcaggtgatgaccaagacagtcacacttgggggagacatctttgacccgcag
ggaactttgagtggaggtgctcgctcacaatcagcatcgattctgtcaagcctgcaggaa
gtaaaggatgttcaggacagcctgaatgagaaggaggcccagcttcaggacactgagcga
cagatgtccagcctgaagggaaccgctgagaagtaccggcagctgaagcagcagcacgag
ctgaagctggaggaggagcagatcctgcagaccaaactgcagcagagctccttccatcag
cagcaggaggagctggagaggctgcagaaggccatcgacgagagtgaggccactttgtgt
ctcaccaaggaggtgcagaagcgagctgaggagaagtacaaggtgctggaaaacaaaatg
aaaaatgccgaggctgagagggagaaggagctgaaagctgcccagcagaaactcaacaaa
gcaaaagcccaagcagacgccttcaacaagactttaaagcagaagcagcaggagtctgaa
gccgtggccttggagctggaggagcttcggagggagcaggcgacctacgagcagcagatt
caggctgtcgatgaggccatgaaggccatccaggaacagatagacagcatggcctgcacc
gtcactcagaacaaggaggcggtgcggaaagcccaggaggagctgaccaaactcaaagaa
gtgatcatggcacaagacaaggagatcaagggaaagaactcggaggccaataagatgaga
gagcagaacaacaacatccagctgaagatcagggaggaggaacacaacatcaataagcat
cataaagacagccaggatgctgctaacaaggtggctcggatgctggaagaacacgactgg
atccagtcggagcgccatttctttggccagccgaactcctcttatgacttcaaagtcaac
aacccccgtgaggcgggccagcggctgaagaagctggaggaaaccacctccaagctggag
aggaacgtcaacaagagagccatgaacatgctgaacgaggcagaggagaggtacaatgac
ctgatgaagaaaaagagaatcgtggagaacgacaaagcaaaaatcctgcagaccattgag
gagttggaccagaagaaaaatgaagctctaaacttggcttggcagaaggtaaacaaggac
tttggctccattttctccaccctgctcccaggagctacagcaaagctggctcccctgcag
ggctgtggtgtcctggaaggtctggagttcaaggtcgccttaggcgacacgtggaaggaa
aacctgactgagctcagtggcggacaaaggtcactcgtggctctgtctctcatcctggcc
atgctgcttttcaagccggctcccatctacatcctggatgaggtggatgcggctctggat
ctgtcgcacacgcagaacatcggccagatgctgcgcacacatttcagacactcccagttc
gtagtcgtgtccctcaaagacggcatgttcacgaacgccaacgtcctgttcaaaaccaag
tttgtggacggcatgtccacggtgacgcggacggcgctcagccagagtgacatcccccat
aaaggtcaagataaagctcgccagaaagacaagaggaacaagcagctcgccgcactttga
DBGET
integrated database retrieval system
