KEGG   Oryzias melastigma (Indian medaka): 112159616
Entry
112159616         CDS       T07439                                 
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04145  Phagosome
oml04210  Apoptosis
oml04517  IgSF CAM signaling
oml04530  Tight junction
oml04540  Gap junction
oml04814  Motor proteins
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    112159616
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112159616
  09143 Cell growth and death
   04210 Apoptosis
    112159616
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112159616
   04540 Gap junction
    112159616
  09142 Cell motility
   04814 Motor proteins
    112159616
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112159616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112159616
   03036 Chromosome and associated proteins [BR:oml03036]
    112159616
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112159616
   04147 Exosome [BR:oml04147]
    112159616
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112159616
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112159616
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112159616
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112159616
  Exosomal proteins of other body fluids (saliva and urine)
   112159616
  Exosomal proteins of colorectal cancer cells
   112159616
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 112159616
NCBI-ProteinID: XP_024149579
LinkDB
Position
LG7:19521855..19524408
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggtcaggctggtgtccagattggcaatgcctgc
tgggagctttactgtctggagcatggaatccagcccgatggacagatgcccagtgacaaa
gctattggtgggggggatgattccttcaacaccttctttagtgagacaggagctggcaag
cacgtgcctagggcggtgtttgtggacctggagcctactgtcattgatgaggtgcgcacc
gggacctaccgacagctgttccaccctgagcaactgatcactggcaaggaagatgctgcc
aacaactatgcccgtgggcactacaccatcggtaaagagatcattgacctggttctggac
aggatccgcaaactggctgaccagtgcactggtcttcaaggcttcctggtgttccacagc
tttggtggtggcaccggctctggtttcacctccctgctgatggagcgtctgtctgtggac
tatggtaaaaagtccaagctggagttctccatctacccagccccccaggtgtccactgct
gtggtggagccctacaactccatcctgaccacccacaccactctggagcactctgactgt
gccttcatggtggacaacgaggccatctatgacatctgccgtaggaacctggacatcgag
cgccccacctacaccaacctgaacaggctgatcagccagatagtgtcttccatcactgcc
tctctacgctttgatggtgctctcaatgtagatctgactgagtttcagaccaacttggtg
ccatatccccgcatccacttccctctggccacctacgcccccgtcatctctgcagagaaa
gcttaccatgagcagctgtcagtggctgagatcaccaacgcctgctttgagccggccaat
cagatggtgaaatgtgatccccgccatggaaagtacatggcctgttgtcttttgtatcgt
ggcgatgtggtgcccaaagatgtgaacgctgccatcgccactattaaaaccaagcgctcc
atccagtttgtggactggtgtcccaccggctttaaagtcggcatcaactaccagccgccc
actgtagtccccggtggagacctggccaaggtccagagggcggtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggctggaccacaagtttgacctgatgtacgct
aagcgcgcctttgtgcactggtatgtgggtgaaggtatggaggagggagagttctctgag
gccagggaggacatggcagctctggagaaagattatgaggaggttggagtcgactccatt
gagggagaaggagaggaagaaggagaagagtattaa

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