Oryzias melastigma (Indian medaka): 112160322
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Entry
112160322 CDS
T07439
Symbol
slc5a7a
Name
(RefSeq) high-affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112160322 (slc5a7a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112160322 (slc5a7a)
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
112160322 (slc5a7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
112160322
NCBI-ProteinID:
XP_024150525
Ensembl:
ENSOMEG00000000911
LinkDB
All DBs
Position
LG3:complement(14531979..14537800)
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AA seq
597 aa
AA seq
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MTIHVEGLVAIAVFYLLILFVGIWAAWKNKHSGEAEGTDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPQYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQLYGKRMGGLLFIPALMGEIFWSAAILNALGATLSVIVDINIKMSVIISALIAIFYTLV
GGLYSVAYTDVVQLFCIFVGLWISVPFALTNPAVSDIAVSAVKKVHQAPWKGSINRDDKW
VWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLIMAVPSVLIGAIGAST
DWNQTSYGGVAPKDKDQADMILPIVLQHLCPPFVSFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLAFRQSASDREIVWVMRITIFVFGGLATMMALVTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVKGTNTYGSVAAYVFGLVLRIGGGEPYLRLPPFIYYPGWIIEQQIHPEEGNI
EDIVKQRFPFKTVSMLASFVANFIFSHLAKYLFESGKISHKYDFLDAVVSRHSGEIMDKT
TLVTRSNNIGLSEMAPVRPRLSVTLAAAFTRRDTLPRETVEEEDEESSPDSSHHNEE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccatgtggaggggcttgtggctattgcagtcttttacctgctgatcctgttc
gtcggcatctgggcagcatggaaaaacaagcactctggagaggcggagggcaccgaccgc
agtgaaaccatcatggtcggtgggagagacatcggcttgtttgtcggtggattcaccatg
acagcaacctgggttggaggaggttacatcaatggcacagctgagtatgtgtatcttcca
caatatggtttggcttgggctcaagccccctttggatatgcactcagtctggttgtgggt
ggcctgttcttcgcaaagcccatgcgctcccgtggttacgtcaccatgctggacccattt
caacagctgtatggaaaacgcatgggcggccttctcttcataccagcacttatgggagag
attttctggtctgctgccatcttgaatgcccttggtgctactctgagcgtcatcgtggac
atcaatattaagatgtcagtcattatatctgcactcattgcaatcttttacaccctggtt
ggagggctgtactcggtggcttacactgatgtagtccagctgttttgcatatttgttggt
ctgtggatcagcgtccctttcgctttgaccaacccggcggtgtcagacatcgctgtcagt
gcagtgaagaaggttcatcaggctccatggaaaggcagcatcaacagagatgacaaatgg
gtttggatcgacaacttctgcctcctgatgctgggaggaatcccctggcaggtgtacttc
cagagagttctctcagcctcgtctgccacctacgcccaggtcctgtccttcctggctgcc
tttgggtgccttatcatggccgtgccctccgttctcatcggagccatcggagcttccaca
gattggaaccagacaagttatggtggcgttgctcccaaagataaggatcaggctgacatg
attctccccattgtgctccaacacctttgcccgccgtttgtctccttctttggtctgggg
gcagtttctgcagctgtcatgtcgtctgcagactcctccatcctttcggcaagctccatg
tttgccagaaacatctaccagttagctttcagacagtcggcctctgatcgagaaattgtt
tgggtgatgcgaatcaccatctttgtgtttggcggtcttgccaccatgatggcgctggtt
accggcacggtttacggcctctggtacttgagctcagacctggtttacgtcatcatcttc
ccccagctgctcagcgtgctgttcgtcaaaggcaccaacacgtacggctcggtggctgcg
tacgtgttcggcttggtgctgcgcataggtggaggtgaaccctacctgaggctgcctccc
ttcatttactaccccggctggattattgagcagcagatccacccggaagagggaaatatc
gaggacatcgtcaagcaaaggttccccttcaagactgtctccatgttggcctcctttgtg
gccaacttcattttttcgcacctggcaaagtacctgtttgaaagcggtaagatctctcac
aaatacgactttctcgacgccgtggtgtccaggcacagtggagaaataatggataagacc
acgctggtaacccgtagtaacaacattgggttgtcggaaatggcgcccgtcagaccacgg
ctgagtgtgaccttggcggccgccttcacccgccgcgacacgctgccaagagaaaccgtc
gaggaggaagacgaggagtccagccccgactcatcccaccataatgaggaatga
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