KEGG   Oryzias melastigma (Indian medaka): 112160898
Entry
112160898         CDS       T07439                                 
Symbol
vegfd
Name
(RefSeq) vascular endothelial growth factor D isoform X1
  KO
K05449  vascular endothelial growth factor C/D
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04010  MAPK signaling pathway
oml04020  Calcium signaling pathway
oml04510  Focal adhesion
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112160898 (vegfd)
   04020 Calcium signaling pathway
    112160898 (vegfd)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112160898 (vegfd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:oml04052]
    112160898 (vegfd)
Cytokines and neuropeptides [BR:oml04052]
 Cytokines
  Growth factors (RTK binding)
   112160898 (vegfd)
SSDB
Motif
Pfam: PDGF
Other DBs
NCBI-GeneID: 112160898
NCBI-ProteinID: XP_024151539
Ensembl: ENSOMEG00000012510
LinkDB
Position
LG3:11631242..11641237
AA seq 313 aa
MRMKPTLCRASFLVTLLVELCWINTGHSMHRKGSEQAVKQWEREVRSCSSLDELLRLTDF
PDWKLWKCRLKLQPPENPAEALSSPLSVGSHRSTRYAAESYSLEILKAIDEEWQRTQCMP
REACVDVAKELGTDPSIFFKPPCVSVHRCSGCCNQEGLTCKNTTTVYVNKTIFSVIPFKF
IPEPVLVRVANHTECRCMEPAIIRRHAQPQRSSDCFPFSRLPEAEDSKRLCATGFIWDCS
TERCIPYPSSAPEPALSSWMPDCEIDVEHCGCLPRPKPILQPRQIYHCQLNSSICASRHQ
RFDKASCRCRLPK
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaggatgaaaccgactctttgcagagcctcttttttggtgactttgcttgtggagctc
tgctggattaatacgggacacagcatgcacaggaagggaagtgagcaagcagtgaagcag
tgggagagggaagtgcgctcctgttccagcctggatgaacttctgcggctcacagacttc
cctgactggaagctgtggaagtgtcgattgaaactgcagcctccagagaacccagcagag
gcgctttcttctccgctttcagtgggatcacaccgctccactcgctatgccgccgagtcc
tacagcctggagatactaaaagccatagatgaggagtggcagcgtactcagtgcatgccc
agggaggcatgtgttgatgtggccaaagagctgggaactgacccctccatcttctttaag
ccgccctgtgtgtctgtgcacaggtgtagtggctgctgcaatcaagaaggcctaacctgc
aagaacacaacgactgtttatgtgaataaaactatcttcagtgtcattcctttcaagttc
ataccagaaccggtgctcgttagagtggcgaaccacaccgagtgcaggtgcatggagccc
gcaataatacgacgtcacgctcaacctcaaaggagcagtgactgctttcccttcagcagg
ctgccggaggcggaggactccaagaggctgtgtgccaccgggttcatttgggattgttcg
actgaaaggtgtataccgtatccttctagcgcaccagagcctgccctcagctcgtggatg
ccagattgtgaaatagacgtggaacactgcgggtgtcttcccagaccaaagcccattctc
cagcccagacaaatctatcactgtcagctgaactcctccatctgtgccagcaggcaccaa
cgttttgataaggcctcatgcagatgcagactgcccaagtag

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