Oryzias melastigma (Indian medaka): 112160898
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Entry
112160898 CDS
T07439
Symbol
vegfd
Name
(RefSeq) vascular endothelial growth factor D isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
oml04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112160898 (vegfd)
04020 Calcium signaling pathway
112160898 (vegfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112160898 (vegfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112160898 (vegfd)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Growth factors (RTK binding)
112160898 (vegfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
112160898
NCBI-ProteinID:
XP_024151539
Ensembl:
ENSOMEG00000012510
LinkDB
All DBs
Position
LG3:11631242..11641237
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AA seq
313 aa
AA seq
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MRMKPTLCRASFLVTLLVELCWINTGHSMHRKGSEQAVKQWEREVRSCSSLDELLRLTDF
PDWKLWKCRLKLQPPENPAEALSSPLSVGSHRSTRYAAESYSLEILKAIDEEWQRTQCMP
REACVDVAKELGTDPSIFFKPPCVSVHRCSGCCNQEGLTCKNTTTVYVNKTIFSVIPFKF
IPEPVLVRVANHTECRCMEPAIIRRHAQPQRSSDCFPFSRLPEAEDSKRLCATGFIWDCS
TERCIPYPSSAPEPALSSWMPDCEIDVEHCGCLPRPKPILQPRQIYHCQLNSSICASRHQ
RFDKASCRCRLPK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaaaccgactctttgcagagcctcttttttggtgactttgcttgtggagctc
tgctggattaatacgggacacagcatgcacaggaagggaagtgagcaagcagtgaagcag
tgggagagggaagtgcgctcctgttccagcctggatgaacttctgcggctcacagacttc
cctgactggaagctgtggaagtgtcgattgaaactgcagcctccagagaacccagcagag
gcgctttcttctccgctttcagtgggatcacaccgctccactcgctatgccgccgagtcc
tacagcctggagatactaaaagccatagatgaggagtggcagcgtactcagtgcatgccc
agggaggcatgtgttgatgtggccaaagagctgggaactgacccctccatcttctttaag
ccgccctgtgtgtctgtgcacaggtgtagtggctgctgcaatcaagaaggcctaacctgc
aagaacacaacgactgtttatgtgaataaaactatcttcagtgtcattcctttcaagttc
ataccagaaccggtgctcgttagagtggcgaaccacaccgagtgcaggtgcatggagccc
gcaataatacgacgtcacgctcaacctcaaaggagcagtgactgctttcccttcagcagg
ctgccggaggcggaggactccaagaggctgtgtgccaccgggttcatttgggattgttcg
actgaaaggtgtataccgtatccttctagcgcaccagagcctgccctcagctcgtggatg
ccagattgtgaaatagacgtggaacactgcgggtgtcttcccagaccaaagcccattctc
cagcccagacaaatctatcactgtcagctgaactcctccatctgtgccagcaggcaccaa
cgttttgataaggcctcatgcagatgcagactgcccaagtag
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