Oryzias melastigma (Indian medaka): 112160961
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Entry
112160961 CDS
T07439
Symbol
chrnb4
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-4 isoform X2
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112160961 (chrnb4)
04082 Neuroactive ligand signaling
112160961 (chrnb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112160961 (chrnb4)
Ion channels [BR:
oml04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112160961 (chrnb4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
112160961
NCBI-ProteinID:
XP_024151657
Ensembl:
ENSOMEG00000014871
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All DBs
Position
LG3:25335123..25348883
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AA seq
547 aa
AA seq
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MFGGKRRSSGSAPDNSRGADGAARMSLAPFVILTYFSALIQCCSSADSEERLMNMLLGKD
RYNPLIRPAINRTERVEVKLQVSLAQLISVHEREQIMTTNVWITQHWVDYRLSWDPAKYE
GIQKLRIPSRHVWLPDIVLYNNADGIYEVTVFTNVIVIFNGSVNWLPPAIYKSSCKIEVK
HFPFDQQNCTLKFRSWTYDHTEIDLILKSEAASMDDFTPSGEWDIIALPGRRTVNPVDPT
YVDLTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFL
LLISKIVPPTSHDVPLIGKYLMFTMVLVTFSIITSVCVLNVHHRSPSTHNMPSWVKLIFL
EKLPALLFMRRPSNFSGRQRLRQQRCLRARRSILGLDPSNTSKTCFTLSSSALLSSDSAF
STPGHKNLAPTTGYGLTHRKGDLSSSDYPHSSFTPTQDYQQRCNSEWTADVKEAVKGVHF
VAEHMMADDDDQSVIEDWKYVAMVVDRMFLWIFVIVCVVGTLGLFLQPVFQTQIVPNQQP
SSDKPRI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggggaagcgccgcagctccggttctgcgcccgacaactcccgcggagcagat
ggtgctgccaggatgagtttggctccttttgtcatcctcacgtacttttccgctttgata
cagtgctgcagcagtgctgactcagaggagcgtttaatgaacatgctgcttggaaaggat
cgctacaatccactcattcgccccgccattaacaggaccgagagagttgaagtgaagctg
caagtgtccctcgcacagctcatcagtgtgcatgaaagagaacaaatcatgaccacaaac
gtttggatcactcagcattgggttgattacagattatcgtgggacccggcaaaatatgaa
ggtattcagaaactgcgtattccatccagacatgtttggctaccggacatcgttctgtac
aacaatgctgatggaatttacgaagtcacagtcttcaccaacgtcatcgtcattttcaat
ggaagtgtcaactggctccctccggccatctataaaagttcctgtaagatcgaagtcaag
cacttcccctttgaccagcagaactgcaccctcaagttccgctcttggacatatgatcac
acagagattgacctgatcctgaaatctgaggcagcgagcatggatgacttcaccccgagt
ggtgagtgggacatcatagctcttcctggcagacggaccgtcaaccccgtggatcccact
tatgtggacctgacttatgacttcattatcaagaggaagccccttttctacaccataaat
ctcatcattccatgtgttttgatcacctctttggccattctggtgttctatttaccatca
gactgtggagagaagatgactctctgtatttctgttctcctggcacttacagtgttcctg
cttttgatttcaaagattgttcctcctacgtcgcacgatgttcccctaattgggaagtac
ctgatgttcaccatggtactggtgaccttctccatcatcaccagtgtttgtgtgctcaat
gtgcaccaccgctctccaagtacccataacatgccttcctgggtcaagttaatatttctt
gagaaactgcctgctttgctgttcatgagacgccccagtaacttctctggccgccaaagg
ttgcgtcagcagcgctgtctaagggccagaagatccatattgggcctggacccctcaaac
acttctaaaacttgtttcacgttgtcgtcttctgcgctactatcctctgactctgccttt
tccactccaggacacaaaaatctagcccctaccacagggtatggcttgacacacaggaag
ggggatttgagctcctctgattatccccacagtagtttcactcccacccaagactatcag
caaagatgcaattcagagtggacagctgatgtgaaagaggctgtgaaaggagtccacttt
gtggctgagcacatgatggcagatgatgatgatcagagcgtgatcgaggactggaagtat
gttgccatggtggtggatcggatgttcctgtggatctttgtgatagtttgcgtggtgggg
accctgggtctgtttctccagcctgtcttccagactcagatcgttcccaaccagcagccc
agctcggacaagcctcgtatctga
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