Oncorhynchus masou masou (cherry salmon): 135508789
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Entry
135508789 CDS
T10723
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
135508789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135508789
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
135508789
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GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
135508789
NCBI-ProteinID:
XP_064785080
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Position
22:18250298..18316977
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AA seq
1135 aa
AA seq
DB search
MECSPRQVLLSCCPGLCLCLRMFHWVVKVVPQPPDAPGSLGEETANPASRNVSKDEVKEV
KAQPAKQKEDDISEDNSIQSGVMTWLSNGFTSALPQPAGTPNLSRSNSVSRSLQEDERNG
MIKWIADGLSKVVPQPDEKYREDIREEEDETEVYNMKDVPDAEPLPHIPVVEMFSEYEEE
DQIPQFPPNVVNWIKNAIPQPVMLPAGYIGALSKAQQAQVLSPSPESLKGDEDSQNSNVV
GWFVTGLGLKLPQPVTRSRDDVEVLPNVSKRPKAVDLVLQEVIEADMKDLEVPTQMTIPT
EMALAQPTQQKQPLKPDEPEQNLPNVPESTTPSLEVAETPTGRWTPFIESIKREAEGIAM
ATMEERLSVHPAVSVEDVDSGGEGGGGGGEHHRHHIPQILTLQDPNFKTLTVPGVSKTSR
QSEKKPKNIWTNIKKVYSQSEEDEEEMEIAVRAWPSQSSILSGDDGLKERPASSASQASY
VVNERLQELVKMFKERTERAKEKLIDPDHSDDDSPTASPARAPTPPPAPPEEPKEEEIEE
QQPKPTLCCKVMPPRWIRALLHYRFPASIDPFTNLVYVLWLFFVTLAWNWNMWLIPVRWA
FPYQTPSNIYLWLLTDYLCDLIYILDILVFQPRLQFVRSGDIVFDKKDMRVNYMKTFRFK
MDVISLVPLELFYFKTGINPLLRFPRLLKIMSFFEFNDRLEGILTKAYVYRVIRTTTYLL
YCLHCNACLYYWGSAYEGLGSTQWVYDGQGNSYIRCYYFAVKTLITIGGLPDPTTLFEII
FQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRACMDNTVKYMASYRIPKDVQNRVKT
WYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSLFQGCDRQMIFDMLKRLR
SVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGG
NRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKARKMLTKDKKPPKEPAQVIP
PRTVTPKLFKAALDVAHQKTGLKGTLAKIKEKINKSSVSLQPSMSSSLPPLSPVSPVSSL
DPERKADATSPTLDSSTLLCPVSHCHGDETLSKEQGQVEGEVAGEGGKKKEKRKE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaatgctcacctcggcaggtgttactgagctgttgtcctggtctttgcctttgtctc
aggatgtttcactgggtggtgaaggtggttcctcagccccctgacgcccctggttctctg
ggagaggagacagccaatcccgcatcaagaaacgtgtctaaagatgaagtgaaagaagtc
aaggcacaaccagccaaacagaaggaagatgatatttctgaggacaacagtattcagagt
ggagtgatgacctggctctccaatggattcacaagtgctcttcctcaaccagcaggcaca
cctaacctcagcagatccaactctgtatccaggtcactgcaggaggatgaaaggaatggg
atgattaagtggattgcagatggactgagcaaagtagtaccccagccagatgaaaagtac
agagaggatattcgagaggaggaggatgaaacagaggtttataacatgaaagatgtgccg
gacgcagagcccctcccacatatacctgtggtggagatgttttcagaatatgaggaagag
gatcagataccacagttcccccccaatgtggttaactggattaagaatgctattcctcag
cctgtgatgctccctgcaggctacataggggccctaagtaaggcccaacaggcccaggtt
ctctcaccatctccggagtccctcaaaggagatgaggactcacagaactcgaatgtcgtg
ggctggttcgtgacgggtctcggcctcaagttgccacagcctgttacgagatccagagat
gatgttgaagttctgccgaatgtctctaaaagacccaaagcagtggacctggttttgcag
gaagtaatagaagcagacatgaaggatctggaggtgccaacacagatgacaataccaaca
gagatggctctggcacagccgacacagcaaaaacagccattgaaaccagatgagcctgaa
cagaatcttccaaatgtgccagagtcaacaaccccatcgctggaggttgctgagaccccg
acaggcaggtggacacccttcatagagagcattaagagagaggctgaaggcatagctatg
gctaccatggaggaacggctcagtgtgcacccagctgtcagtgtggaggatgtggattcc
ggcggagagggaggagggggcggaggggagcaccaccgccaccacattccccaaatcctt
accctacaggaccccaacttcaagaccctgaccgtacccggagtgtccaaaaccagccgt
cagagtgagaagaaacccaagaatatctggaccaatataaagaaggtgtactctcagagt
gaggaggatgaagaggagatggagatcgcagtgagggcatggcctagccagtccagcatc
ctcagtggagacgatgggctaaaggagcgccctgcgtcttccgctagccaggccagctac
gtggtgaacgagcgcctacaggagctggtcaagatgtttaaggagaggacagaaagggcc
aaagagaaactcatagacccagatcactctgatgatgacagtccaactgcctcccctgcg
agagctccaacaccacctcctgcgcctccagaggagccgaaggaggaggagatagaggag
cagcaacccaagcctacattatgctgcaaggtgatgcctcctcgctggatcagagctctg
ctgcactaccgcttccccgctagcatcgaccccttcaccaatctggtctatgtgctgtgg
ctgtttttcgtcaccttggcatggaactggaacatgtggcttatcccggtgcgctgggcc
ttcccctaccagacccccagtaacatctacctgtggctactcactgactatctgtgtgac
ctcatctacatcctggacatcctggtcttccagccccgcctgcagtttgtccgcagtgga
gacatagtgtttgacaaaaaggacatgagagtgaattacatgaaaaccttccggttcaag
atggatgtcatcagtcttgttccactggagttgttctattttaaaactgggatcaaccca
ctcctccgcttcccacgactactaaagataatgtctttctttgagttcaacgaccgtctt
gagggcatccttaccaaagcctacgtttacagagtgatccggaccaccacctacctgctg
tactgcctgcactgtaatgcctgtctgtactactggggctctgcgtatgaaggtctgggc
tccacgcagtgggtctatgacggacagggcaacagttacatccgctgctactactttgct
gtgaagaccctaatcaccattggtggactgccggaccccacaacgctctttgaaatcatc
tttcagctcataaactactttgttggagtgtttgccttttccatcatgattggacagatg
agagatgtggttggtgcagccacagcaggacagacgtactacagagcatgcatggacaac
actgtcaaatacatggcctcctaccgtatccctaaagacgtgcagaaccgggttaaaacc
tggtacaactacacctggcagtcccagggcatgctggatgaacaggagcttctggttcag
ctcccagacaagatgaggctggacatcgctgtggatgtcaactatgacattgtcagtaaa
gtgtctctcttccagggttgcgatagacagatgatctttgacatgctgaagagactgagg
tctgttgtttacctcccaggggactatgtctgcaaaaagggtgaagttgggcgggaaatg
tacatcatcaaagccggagaggtgcaggtggtgggcgggccagacgggaagactgtgttt
gtcacactgagggcggggtccgtgtttggggaaatcagcttgctggcagttggtggaggg
aacaggagaacagcaaacgtggtggctcatggcttcgccaacctgttcatcctggacaag
aaggacctcaatgagattctagtgcattaccccgagtcccagaagctgctccgcaagaag
gccaggaagatgctcacgaaagataagaagcctccgaaggagccggcccaggtgatccct
cctcgaacggtcacgcccaagctattcaaagctgctctggatgtggcgcatcagaaaaca
ggcctcaaagggaccctggccaagattaaggagaagatcaacaaatccagcgtttctcta
cagccctccatgtcctcctccctgcctcccttgtccccagtctctccagtctccagtctg
gacccagagcgcaaggctgacgccacgtcaccaaccttagacagctccacgctgctctgc
cccgtctcccattgtcacggagatgagacactctccaaggagcagggccaagtggaggga
gaagttgcaggagagggtgggaagaagaaagaaaagagaaaggaatga
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