Oncorhynchus masou masou (cherry salmon): 135513232
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Entry
135513232 CDS
T10723
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Cilium and associated proteins [BR:
omm03037
]
Primary cilia and associated proteins
USH complex and associated proteins
135513232 (ushbp1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135513232
NCBI-ProteinID:
XP_064792124
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Position
24:108570288..108594574
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AA seq
756 aa
AA seq
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MEAMEEFKRGRSDTLDIQSEGEEMTPVTLVTTMTPDPEVNSEPSQAELAQCEAEVGTLLS
IIAELNRKMGALQAPSDPDDLKPQEPVILPPAPASLSSPPPSLCNPEKHTGTASKAPVTN
REGSGEVWSELQGVMSVLEGSINTRRAWAASHTACGKDGQMEHLTAARDSWVQVTQVLEE
MEREFGISYPSGLPPEERQQYQKDILALHQRNCDLRSSLQSRQEELEGAKVTVGDIEVER
NSLHERLLGLHKAWRSGSLSPPYSSSGSSSGVVLSPGWASPGSPGSPSFLGSPPFPGSPL
FLRRPIAMGIFPALSTGGDISSSASPSPSPWPGSVPQGSPCRSPSPSVSLEGETDRLQRC
IERLKARNERLTAALDKRKGESELISMTLSRHEADSTALQMALQYCEECEEAYSELLSVY
EGRRQQVIPHWRHIAGPVMESQQPNSPRPSLRSLRTEELSTSFSTPGGAVETETHIQTRF
HLYYTARGSEVEGCEADIRERIERLKQDRAAVCVPKPGPGGEGNLSPDTGTLAGLRGTHG
GQGGQDTSNPQSTKREKAVLLYDLVTVREEMSELRGLIRLTEKERRCLDWSLMAQKAQDA
AGALISESLAEEIEDRRTEQQRTSENEDKLSSDGDIPGPQNRAILRELQAVLQREQVLKR
RVSVVRESLDLVLSDSASRRRGNDEQMARLAQAHSHLSLFCSKATGSYRNARRKYREKLW
RLESQVSAMSDRHMTQIGALKATLEAMECRREETVL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaggagttcaaacgagggagatctgataccctggacatacagtcagag
ggtgaggagatgaccccggttaccctggtaaccacaatgacccctgaccccgaggtgaac
tctgagccttcccaggcagagctggctcagtgtgaggcggaggtcggaactctactcagc
atcattgctgaactcaacaggaaaatgggcgcattacaagcaccaagtgatccagatgac
cttaaaccacaggagccagtcatcctccctccggctccagcctccctgtccagcccccct
ccatccctctgcaacccagagaaacacactggcaccgcatctaaagccccagtaaccaac
agagagggtagtggtgaagtgtggtcagaactccagggagtcatgtctgttctggagggt
tccattaacaccaggagggcctgggctgcctctcacactgcctgtggcaaggacggacag
atggaacacctcacagccgccagggacagctgggtacaagtcacacaggtcttagaggag
atggagagagagtttgggatctcgtacccgtctggtctgccccccgaggagcgtcagcaa
taccagaaggacatcctggcacttcaccagcggaactgtgacctgcgcagcagcctacaa
agcagacaggaagaactagagggggcaaaggtcacggtgggagacatagaggttgagagg
aacagtctacatgagaggttactgggcctccataaggcgtggcgatcaggcagcctctct
cctccctacagctcttcagggagctccagtggtgtggttctgagtcctggctgggcctcc
cctggttcccctggttccccttcattccttggctctcctcccttccccgggtcacccctg
ttcctcagaagacccatcgccatggggatcttcccggccctctctactgggggggacata
tcctcctcggcctctccatcaccctccccctggcctgggagtgtcccacaaggcagcccc
tgtcgtagccccagccccagcgtcagcctggagggtgagacagacagactacagaggtgt
atagaaaggctgaaggcccggaacgagcgtctgactgcagctctggacaagagaaaggga
gagtctgagctgatcagtatgacgctcagcagacacgaagctgacagcacagccctgcag
atggctctccaatactgcgaggagtgtgaggaggcctacagtgagttactgtctgtgtac
gagggcaggagacagcaggtcataccacactggagacacatagcaggcccggtcatggag
agtcagcagcccaacagtcccaggccgtcccttaggagtctaagaactgaggagttgtca
acctccttctcaacaccagggggtgctgttgagacagaaacacacatccagaccaggttc
catctctattatacagccagggggtccgaggtagaggggtgcgaggcggacattcgggag
cgtatcgagcggttgaagcaggacagggcagcagtgtgtgtccctaagccagggcctggg
ggagaggggaatctcagcccagatacaggcaccctggctgggcttagagggacccatgga
ggacaagggggccaggacacctccaacccccagagcaccaagagagagaaggctgttctg
ctctatgacctggtcactgtcagggaggagatgtcggagctgcgaggtttaatccgtctg
acggagaaggagcggaggtgtctggactggagtctgatggcccagaaggcccaggatgca
gctggagccctgatctctgagagcctcgctgaggagatagaggacaggaggacagaacag
cagaggacttctgagaacgaggacaagctaagcagcgatggagacatccctgggcctcaa
aaccgtgccatccttcgagagctacaggctgtcctgcaacgggagcaggtgctgaagagg
agagtgtcggtggtgagggagtctctggacttggttctctccgacagcgcctctcgcagg
agaggcaacgatgagcagatggctcggctcgcacaagctcacagccatctgtctctgttt
tgcagcaaggccacagggtcgtaccggaacgctcgcaggaagtacagggagaagctgtgg
aggctggagagtcaggtgtcagcaatgtcagatcgtcacatgacccagatcggggccctg
aaggccacgctggaggccatggagtgcaggagggaggagactgtactctga
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