KEGG   Oncorhynchus masou masou (cherry salmon): 135514185
Entry
135514185         CDS       T10723                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135514185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omm03041]
    135514185
Spliceosome [BR:omm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135514185
 Complex B
    135514185
 Complex C
   U2 SnRNP specific factors
    135514185
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 135514185
NCBI-ProteinID: XP_064793541
LinkDB
Position
25:35157161..35171820
AA seq 789 aa
MPPGPVQLVQLEPNSKADEPTGETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQALLNSQQLP
QKVQAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKE
QRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLMKLKREAENPREVLDQVRYRVEW
AKFQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARIL
TQERYDKFGESEEVEMEVESEDEDDVEQEDRDDGRPTQPDQDTQLQDMDEGSDEEDDGKA
PLPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAKTLDEFLISPITGERIQASKMQEH
MRIGLLDPRWLEQRDRGIRERQIEDEVYAPGMDIESSLKQLAERRTDIFGVEETAIGKKI
GEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDESKEKIGPS
KPELYHHHHQSPLISSAPLLPKPSPPMNTMARAPPSMLPSVRTTLLSAVPVIPRPPMAPV
QMRLAPGQVLTPMPPMMHAPRINVVPMPQPPHMMAPRPPPMVVPTAFVPAPPVRSPRPRP
DPQPPSQPPPPHNDEPASKKMKTEDNLMPEEEFLRRYKGSVSVTVQVPNMQDKTEWKLSG
QALNFTIPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNINNGSVIHLA
LKERGGRKK
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtacaacttgttcagcttgagcccaacagcaaggcagatgagcct
acaggggaaaccccagcaacgaaacccatagttgggatcatctatccacctcctgaggtc
cgaaacatcgttgataagactgccagctttgttgccaggaatggaccagagttcgaagca
aggatccgtcagaatgagatcaacaacccaaagttcaacttcctgaaccccaatgacccc
taccatgcttactatcgccacaaggtcaatgaattcaaggagggcaagggccaggagccg
tctgcggccgtgccaaaggtcatgcagcagcaggccctgctgaactcgcagcagcttcct
caaaaggtgcaggcccaggtgattcatgagacagtggtgccaaaggagcctccgcctgag
tttgagttcattgctgaccctccttcaatatcggcattcgacctggatgttgtcaagctg
accgcccagtttgtggctcgcaacgggcgccagttcctcacacagctcatgcagaaagaa
cagcgaaattaccagtttgacttcctgagacctcaacacagcctcttcaactacttcacc
aagctggtggagcagtacactaagattctgatccctcccaagggactactcatgaagctg
aaaagagaggctgagaaccccagggaggtgctggaccaagtgaggtaccgtgttgagtgg
gcaaaatttcaggagcgtgaaaggaagaaggaggaggaggagcgggagaaggagcgtgtg
tcctacgcccaaattgactggcatgactttgtagtggtggagaccgtggacttccaacct
aatgagcaaggccactttccaccacccaccacacctgaggagctgggagctcgcatcctg
acccaggagcgttatgacaagtttggagagagcgaggaggtggagatggaggttgaaagt
gaggacgaggatgacgttgagcaggaggatcgggatgatgggcgtcccacacagcctgat
caggacacacagctgcaagacatggatgagggttctgatgaagaggatgatggcaaggca
ccattgcccccagacaaccccatgccacccccactgccccctactccagaccaggtcatt
atccgcaaggactacgaccccaaggcctccaagccccagcctccagccaagactctggat
gagttcctcatctctcccatcacgggtgagaggatccaagccagtaagatgcaggagcat
atgcgcatcggactactggatccccgctggctggagcagagggaccgcggcatcagagag
aggcaaatagaggatgaggtttatgcccctggcatggacattgagagcagcctaaaacag
ctggctgagaggcgtactgatatctttggtgtggaggagaccgccatcggtaagaagatt
ggagaagaggagatccagaagcctgaggagaaggtgacctgggatgggcactctggcagc
atggcgcgtactcagcaggcagcacaggccaacatcaccctacaagagcagattgaggcc
attcacaaggccaagggactggtgcaggaggatgaaagcaaagagaagattgggccaagc
aagcctgagctttaccatcatcatcatcaatcgcccctcatctcctctgccccccttctg
cccaaacccagccctccaatgaacacgatggctcgggcccctccttccatgctgccctct
gtacgcaccacgctcctgtcagctgtgcctgtgattccacggccccccatggcccctgtg
cagatgcgcctagccccagggcaggttctaacacccatgccccccatgatgcatgctccc
cgcatcaacgtggtgcccatgccccaaccacctcacatgatggcccccagaccaccaccc
atggtggtcccaactgcatttgtccctgcccctccagtccgcagcccccgcccccgccct
gacccacagccaccttcccagccacccccaccccataatgatgagcctgccagcaagaag
atgaagacagaggacaacctcatgccagaggaggagttcctccgtagatacaagggttca
gtgtcggtcacagtgcaagttcccaacatgcaggacaagacagaatggaagctaagtgga
caagcgctcaatttcactatcccactcacagatcaggtgtctgttattaaagtgaaaatc
catgaagccactggaatgccagccggaaagcaaaagctgcagtatgagggaattttcatc
aaagattccaactcgctggcctactacaacataaacaacggttcagtcatacacctggca
ttgaaggagagaggtgggagaaagaagtga

DBGET integrated database retrieval system