Oncorhynchus masou masou (cherry salmon): 135514669
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Entry
135514669 CDS
T10723
Symbol
aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03410
Base excision repair
Brite
Enzymes [BR:
omm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
135514669 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
135514669 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
135514669 (aptx)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
135514669 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
135514669 (aptx)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135514669
NCBI-ProteinID:
XP_064794278
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Position
1:11302066..11303611
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AA seq
348 aa
AA seq
DB search
MSICLLISKNGRHKPIHLPHLQTVVLGRSPETTIKDKKCSREQVELKADCNKGYISVKQL
GVNPTSVDSEVVGKGNQVEMRSGQQLHMVNELYPYTVCFKEDPSNSQSSVGTKRPCGPAS
EEREFHREPPGHKVPRKTEDSTQCKHGGSTSTNTQSEPQTTEKTETLGYWSQGLKASMQD
PKMQVYKDDRVVVIMDKYPKAHYHWLVLPWESIPSLKTLHRGHCDLLRHMNQVADRIVQQ
QCPDAGLLHFRQGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESQEVIQM
LEKDGKVTVKEGTNELLKLPLCCHVCGMALSTIPQLKEHLKSHPYGRL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttgtttgctgatcagcaaaaatggaaggcataaaccgattcatctacctcac
ctacagacagttgtcttgggtcggagtccagaaacaacgataaaagacaaaaaatgttcc
agggagcaagttgagctcaaggctgactgcaacaaagggtatatcagtgtaaaacaactg
ggtgtcaaccccactagtgtggactctgaggtggtgggtaaaggcaatcaagtggagatg
agatctggccagcagctgcacatggtcaatgagctgtacccttatactgtgtgcttcaaa
gaggatccatccaactctcagtccagtgtgggcaccaagaggccctgtgggcctgcctca
gaggagcgggagtttcacagagagccccccgggcataaagtaccaaggaaaacagaggac
tccactcagtgcaagcatggagggtccacctccactaacacacagtctgaacctcaaaca
acagagaaaacagaaactttaggatattggagccaaggattgaaagcctcaatgcaagac
cccaaaatgcaggtttacaaggatgaccgagtagttgttatcatggacaagtaccccaag
gctcactaccactggctggtcctgccctgggagtccatccccagtctgaagacactgcac
agggggcactgtgatctgttgaggcacatgaaccaggtagcagacaggattgtacaacag
cagtgccccgatgctggcctgttacacttccgccagggctaccacgccatccccagtatg
agccatgtccatctacacgtgatcagccaggactttgactccccttgtttaaagaacaag
aaacactggaattcattcacaaccgactatttcatagaatctcaagaagtcatccagatg
ctggaaaaggatgggaaggtcacagtaaaagaagggacaaatgagttgttgaaactacct
ctctgctgtcacgtgtgtggcatggcactgtccaccataccacaacttaaggaacacctg
aaatctcacccctatggtagattgtga
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