Oncorhynchus masou masou (cherry salmon): 135516137
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Entry
135516137 CDS
T10723
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135516137
Membrane trafficking [BR:
omm04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135516137
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_7
TPR_8
SH3_1
TPR_NPHP3
TPR_10
SH3_9
TPR_4
Motif
Other DBs
NCBI-GeneID:
135516137
NCBI-ProteinID:
XP_064796278
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All DBs
Position
27:complement(40147721..40167599)
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AA seq
1277 aa
AA seq
DB search
MVEGPDRHPADEGSQEVLRGKLCLLEADSAEVNALFTELSARLVTINSEENVIFVAFKTF
EEIWKFTTYYTMGFLGQCMENLLLDQDFWLSSMDQKNVGIEISIQEDTLNLMYKGILMQE
GSFFASCSSTQMFDSSTSGSDLYLEQGDIALFEPPFLESGWTVLSLGDGARGTKPKPALE
PVIPFHQWFLKSCAENILVGSGKPACDFLCQFATGSCIATVEYDAGGPDELSLEQGDHIL
IVGLLVSCFNWFTGRLERTGEVGLVMTTLVKPADDTLCELADIFLDQEERLFFNLKEEQI
KEETIALLKKISQNDVGSVYKLDLIDQPDSPKEPTQNGSQGNMDAHQQAELKRKIEEILQ
ERKEKVPCATVMTNGTPEDHSVSSKTTLPSGPHFTVHPVEEGTITNQENLLPLLYFLGGS
EYKPDFGTLYGQTPELLLDTFNGHSDDIDKLVAYLGIARETARKKRLHWSQSRLCLLLGK
LCAGSSKFSQARVYFEEALSIPRDGFTDMLMLANIYVNLAVIYLMQKNTEKYFALSERIA
ALLMGIPDCASTVEKDSEVLKFILKKAVLAHNKMAEARACFLLAKLHWRRGEGADAVPFL
ERLLVLSAEPAGVRSVRPSHGYLSLGRLYSQLSLPHLCVSSARRATMHPSATLADCLNGM
GLVLENTARLFGIRKQEDTIPAQVALYLSRSLSFTGELAGVGGNGDHTLSQALTLCLSQL
FQKHGKLGRAVRSMHTLIDDHCGPSSSSGATSSPERISALVWLAWLHICDNQPEVSLDVL
DSVLASMPEHCTTPQEGLVHNMRGVALRCTGDLRRAAESYQAAIYVCEEFEDRANWAVAQ
ANLGLLSLKAGAKGLAERHLTEAVELFSELGGEEHEVNFITVLLELGQHCVNQRFLERGK
IYFEWALLMAIKSNHLDSQLSATRRLCHLYGAVCSDEAQCIIYNEHQLAILATRGDRGQE
GEVLETISQLYLSLGTERARRSALDYTKRSLGIFIDLGRKEKEAYAWLQAGKIYQMLGQT
ELVDLYVQVAQDVGLSTGDTHFILQLLEAAGDVFFNLNQEREKAVCFYRDRALPIAVRTS
STEARLRLSNKLVELLLQLKLYGEAVEYAQAALDISVTLGNRLNERVAFHRLATLYHCLG
QFELAEHYYLKTLSLCPTPLEFDEETLYYVRVYQTLGDIIFYDLKDPYDAAGYYHLALAA
AMDLGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKARAFASDLNVRRINLSPDQNFSS
MSQYKSNRFSTQEPTIY
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggggcccgacaggcaccctgcagacgaggggtctcaggaagtgctgcggggg
aaactctgccttctggaggccgacagcgcggaggtcaacgctctctttacggaactctct
gccaggctggtcaccatcaacagtgaagaaaacgttatattcgtcgcattcaaaacattc
gaagagatatggaagttcaccacatattacacaatgggctttctgggtcagtgcatggag
aacctgctcctagaccaggatttctggttgagctctatggaccagaagaacgtgggcata
gagatctctatccaagaggacactctcaacctaatgtacaaaggcattctcatgcaagag
ggttccttcttcgccagctgcagttccacccagatgtttgacagctccacctctggtagt
gacctctacctggagcagggggacatagccctgttcgagcccccgttcttggagtcgggg
tggactgtactgtccctgggggatggggcccgggggaccaagcccaaaccagccctggag
cccgtcatacccttccaccaatggttcctcaaatcctgtgcggagaacatcttagttggt
agtggcaagccagcatgtgacttcctctgccagtttgccacaggctcctgcattgccact
gtggagtatgacgcaggaggaccagatgagctgagcctggagcagggtgatcacatcctc
attgtgggcctgttggtgtcttgcttcaattggttcactggcaggctggagaggacagga
gaggtgggactggtgatgacaacactggtcaagccagctgatgataccctttgtgagttg
gcggacatattcctagaccaagaagaaaggttattttttaacctgaaagaagagcagatc
aaagaagaaactattgccttgctgaagaaaatctcccagaatgatgttggatccgtctac
aaacttgatctgattgatcaaccagattctccaaaggaaccaactcaaaatggttcccaa
ggaaacatggatgctcaccaacaagcagaactgaagaggaagatagaagagattctacaa
gaaaggaaggagaaagtgccttgtgcgactgtgatgacaaacggaactccggaggaccac
agtgtgtcctctaagactacattacccagtgggcctcacttcaccgtccacccagtagag
gaaggcaccatcaccaaccaagagaacctccttcctcttctatactttctgggcggctct
gagtacaagccagattttggcaccctctacggacaaaccccagaactgctccttgacact
ttcaacggccactcggacgacattgacaaattggtggcatacttaggcatagccagggaa
acggccaggaagaagcgtctccattggtcgcagagccgcctctgtttgcttttggggaaa
ctctgcgcgggaagttcaaaattctcccaagctcgagtctacttcgaggaggccctcagc
atccctcgagatggatttacagacatgctaatgctagctaacatctacgtaaacctagct
gtgatctatctcatgcaaaaaaacacagagaagtactttgctttgtcagagcggattgct
gcattgcttatgggtatccctgactgcgcctctactgtagaaaaagactctgaagttctc
aagttcatcctgaagaaagcggttctcgctcataacaagatggctgaagcacgtgcttgt
ttccttctagcaaagctccactggaggcgaggcgagggggcggacgctgtcccgttcttg
gagagacttctggttctctcggcagagccagcaggtgtccggagcgtcaggcccagccat
ggctacctgagcctggggagactgtacagccagctctccctcccccatctctgtgtcagc
tcagccaggagagccacaatgcatccgtccgctacgctagccgattgtctgaatggaatg
gggctagtgctggagaacacagccagactctttgggatccggaagcaggaagacaccatt
ccagctcaagtggctctgtatctgagccggtcgctctctttcactggagaattagctgga
gtcggtggcaatggtgaccacactctaagccaggcactcacactctgtctatcccaactg
tttcagaaacacgggaaactaggacgcgcggtgcgctccatgcacactctcatagacgat
cattgcgggccgtcatcctcatcgggcgccactagcagccctgaacgcatcagcgccctc
gtgtggctagcctggctgcacatctgtgacaaccaaccggaggtatcacttgatgttcta
gactcagtgctggcctccatgccagaacactgcactactccacaggaaggattggtccac
aacatgaggggtgtggcccttcgatgcacaggagacctgcggagggcggcagaaagctac
caggcggccatttatgtgtgtgaggagtttgaggacagggccaactgggcggtcgcgcag
gctaacctggggttgctgagtctgaaggctggggctaagggtctggcggagaggcatctc
acggaagccgtggagctgttctcagagctgggtggagaggagcatgaggtgaactttata
acagtgctgctggagctgggacaacactgtgtgaaccagagattcctggaaagagggaag
atctactttgagtgggctctgctgatggccattaagtcaaaccatttagacagtcagtta
agtgcgacgcggcgtctgtgccacctgtacggagcggtatgttctgacgaagctcagtgc
ataatctacaacgaacatcagcttgccatactggcgacccggggagacaggggacaggag
ggggaggtgctggagaccatcagccagctatacctcagtctggggacagagagggctagg
cggtcggctctggactacaccaagcgtagcctgggtatcttcatcgacctgggccggaag
gaaaaggaggcatatgcctggctgcaggctgggaagatataccaaatgctgggccaaacc
gaactggtggacctctatgtacaggtggcccaagatgtgggtctgagtacaggagacaca
cactttatcctacagctgctggaggcagcaggggatgtcttcttcaacctcaaccaggag
agagagaaggctgtctgcttctatagggaccgtgccctgcccatcgctgtgaggaccagc
agtacagaggccagactaaggctgtctaacaagctggtggagctgctactgcaactgaag
ctgtatggggaggccgtggagtacgcccaggccgccctggacatcagtgttacattggga
aatcgtctaaatgagcgtgtggccttccaccggctggccaccctgtaccactgtctgggt
cagtttgaactggctgaacactactacctgaagaccctctccctctgccccacgcccctg
gagtttgatgaggaaaccctgtactacgttcgagtctatcagacgctaggggacattatc
ttctatgacctgaaggacccctacgatgccgcggggtactaccacctggcgctggcagca
gccatggacctcggcaacaagaagtcccagctccagctttgcacacgattggctacgatc
taccacaactttctggttgatcgggagctctcactcttcttctaccagaaagcgcgagcg
ttcgcctcagacctcaatgtacgccgcatcaacctctcgcccgaccagaacttcagtagt
atgtcacagtacaagtcgaataggtttagcactcaggaaccaacaatttattaa
DBGET
integrated database retrieval system
