Oncorhynchus masou masou (cherry salmon): 135518140
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Entry
135518140 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B-like
KO
K08770
ubiquitin C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03320
PPAR signaling pathway
omm04120
Ubiquitin mediated proteolysis
omm04137
Mitophagy - animal
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135518140
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135518140
04137 Mitophagy - animal
135518140
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
135518140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135518140
Ubiquitin system [BR:
omm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
135518140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
135518140
NCBI-ProteinID:
XP_064799129
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Position
28:67709000..67711452
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AA seq
305 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtaaagaccttaactggtaagaccatcacactggaggtggaacccagt
gacaccatcgagaacgttaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc
gttaaaaccctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgag
aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggag
tccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttcgttaaaaccctg
actggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaacgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggtatgcagatcttcgttaaaaccctgactggtaagacc
atcaccctcgaggttgagcccagtgacaccatcgagaacgtcaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatctttgccggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaggagtccacccttcacctggtcctgcgt
cttcgtggaggcaactag
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integrated database retrieval system
