Oncorhynchus masou masou (cherry salmon): 135519603
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Entry
135519603 CDS
T10723
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135519603
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135519603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
PFF1_TM
GPHH
Zip
IQ
New_glue
HH_YBHG
Motif
Other DBs
NCBI-GeneID:
135519603
NCBI-ProteinID:
XP_064800908
LinkDB
All DBs
Position
29:complement(39085703..39141374)
Genome browser
AA seq
2006 aa
AA seq
DB search
MMEQLLVPPGPDSFRPFCRESLDAIERRIADENAKKSKAKPNNDDDNGPKPSSDLEAGKS
LPLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLNPFNPLRRI
SIKVLVHSLFSMVIMLTILTNCAFMTLSQPPDWTKNVEYTFTGIYTFESLIKILARGFCV
GKFTFLRDPWNWLDFCVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIPLNSTNLFDDSVDFNGTDLN
KTSSFNWTYYTNDPKNYYYLPGKKDALLCGNGSGAGLCPEGFWCIKAGRNPDYGYTSFDT
FSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYD
EQNQATIEEAQQKEEEFQKLKRQQEDAQAAAAVTAAESGEFSERGELTDTSSEASKLSSK
SAKERRNRRKKKKQREEEERGDNDKFHRSESEGSMQKSRFRFSIDASNLLNYDMRCSTPH
QSFLSIRGPLFSSRRNSQASLFSFRDRAQDMGSENDFADDENSTFEDNDSRRGSLFVPRR
SDRRSSNLSQNSMSSHVLLPANGKKHSSVDCNGVVSLVGRASLPTSPEGLLLPEVTVDKA
STDDNGNTTEPEYRKARCESYQASMNLLEDPGARQRAFSVASVITNTMEELEESRQECPP
CWYKFANTFLIWDCCPAWLRIKKTVKMIVMDPFVDLTITICIVLNTVFMAMEHHSMSGDF
KKMLSVGNLVFTGIFTAEMCFKIIALDPYCYFKEGWNIFDGIIVSLSLMEIGLANVSGMS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNY
RDCVCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVM
VIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVCRSFHS
ICLRKKKGSLNEDKPLDDLHRTNYNSNHTTGEIMKDPEYVKDDNGTTGGVGMGVGSNAAG
KYIVNDNTDYMQFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDIEGSKEQLGKDRPL
SSSEGSTVDIRPPGEREGSVDMEPEESMEAEGCFTDGCVRRFQCCQVNVEEGKWKMWWTL
RKTCFRIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEFADKVFTYIFILEM
LLKWVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRAL
SRFEGMRVVINALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCINMTTRERFEV
RDVANKTECLALKGTHWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLDDQP
DYEVNLYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPVNKFQGFVFDFITKQAFDIVIMILICLNMVTMMVETDDQENDIRK
ILYNINLVFIVMFTGECILKMISLRQYYFTIGWNVFDFIVVILSIIGMFLSEVIEKYLVS
PTLFRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKKESGIDDMFNFETFGNSMICLFQITTSGGWDVLLAPILNKGEPDCDSRKEHPGST
YKGGDCGNPSVAIIFFVSYIIICFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYE
VWEKFDARATQFMQYDKLSDFADALDPPLRISKPNKIQLSSMDLPMVSGERIHCLDILFA
FTKRVLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKLEDMSALVIQRAFRRYL
LKRIVKRASAMYKEKIQSGGTLLDKEVLVIDKFNEISNSDRTDMTPSTASPPSYDSVTKP
EKNKYEKDKRKKEVKEKKKYMDVGKI
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacagctacttgtaccgccaggaccagacagcttccgcccgttttgtcgtgag
tccctcgatgccatcgagaggcggatcgctgacgagaacgccaagaagtccaaggcgaag
cccaacaatgatgacgacaatgggcctaagcccagcagtgacctggaggctggcaaatca
ctgccactcatatatggggacattcccaaaggattggtgtctacaccactggaggacttg
gacaccttttacagcaatcagaaaacctttatagtgttgaaccgagggaaggccatcttc
cgcttcaacgccactcctgcattgtatgtcttaaaccccttcaaccctcttagaagaata
tcaattaaggttttggtacactcattgttcagcatggtaatcatgttgactatccttacc
aactgtgcgtttatgaccctgagtcagcccccagactggacaaagaatgtcgagtacaca
ttcactggaatctatacatttgaatctcttataaaaattctggcaaggggcttctgtgta
gggaagtttacttttctccgagacccatggaactggttggatttctgtgttattgtcatg
gcatatgtcacagagtttgtggacctgggcaatgtctcagcactgagaacgttcagggtt
ctccgagctttgaaaactatatcggtcatcccaggcctgaagaccattgtgggagcgctg
atccagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtc
tttgccctagtagggctgcagctgttcatggggaatttaagaaacaaatgtttaaggatc
cctcttaactcaaccaacctctttgatgattcagtcgactttaatgggacggacctcaac
aagaccagctcgttcaactggacctattacacgaatgatcccaaaaattattactacctc
ccaggtaaaaaagatgctttgctttgtggaaatggcagtggtgccgggctgtgcccagag
ggattctggtgcatcaaagcaggccggaacccagattacggctacaccagttttgacacg
ttcagctgggccttcctgtctctgttcagactgatgactcaggactactgggagaacctc
taccagcagaccctgagggctgctgggaagccatacatgatcttctttgtgttggtcatc
ttcctgggctccttctaccttatcaacctaatcctggctgtggttgccatggcctacgat
gagcagaaccaggccaccattgaggaggctcagcagaaggaggaggagtttcagaagctg
aagagacagcaggaggacgcacaggcggcggcagcggtgacagcggctgagagtggggag
ttcagtgagagaggggagctcactgacacctcctcagaggcctccaaactcagctccaag
agtgccaaagagagacgcaacaggcgcaagaagaaaaagcagagagaagaggaggagaga
ggggacaatgacaagtttcacaggtctgagtctgagggcagtatgcaaaagagtcgtttc
cgcttctccatagatgcctccaacctgctcaactacgacatgagatgttccacaccacac
cagtccttcctgagtatccgtggacccctgttctcatccagacgaaacagccaggcaagc
ctcttcagcttccgggaccgagcgcaagacatgggctcggagaacgactttgccgacgac
gagaacagtactttcgaggacaacgacagtcgccggggatctctgtttgtcccccggcgg
agcgaccggcgctccagcaacctcagccagaacagcatgtcatcacatgtcctgttgccc
gccaatgggaagaagcacagctccgtggattgcaatggggtggtgtccctggtgggcagg
gcttcacttcccacatcacctgagggactccttctgccagaggtgacagtagataaagcc
tctaccgatgacaacggcaacactacggagccagagtacagaaaggcccgatgtgaatcg
taccaggcctctatgaacctcctggaggacccaggtgccaggcagagggccttcagtgta
gctagtgttataactaacactatggaagaacttgaagagtcgagacaggagtgccctcct
tgctggtacaagttcgccaacaccttcctcatctgggactgttgtccggcatggctgagg
atcaagaagacagtcaagatgatcgtgatggacccgtttgtagacctgactatcaccata
tgtattgttctgaacacagtgttcatggctatggagcatcactcaatgtctggggatttc
aaaaaaatgctttctgtgggaaacctggtgttcacaggtatcttcacagctgagatgtgt
ttcaagattattgctttggatccgtactgttattttaaggaaggctggaatatatttgat
ggtatcattgtcagtttgagcttgatggagattggcttggccaacgtgtctggaatgtct
gtcctcagatcattccgattgctgagagtgttcaaactggccaagtcttggcccacactg
aacatgctgatcaagatcattggtaactcagtgggggctctgggtaacctcaccctggtc
ctggccatcatcgtcttcatcttcgccgtggtgggcatgcagctgtttgggaagaactac
agagactgtgtgtgtaagatctctacagactgcacactgccccgctggcacatgcatgac
ttcttccactccttcctgattgtgttccgggtgctgtgtggggagtggatcgagactatg
tgggactgtatggaggtggctggccagagcatgtgtctcattgtcttcatgatggtcatg
gtcatcgggaacctggtggtcctgaatttgttcctggccctgctgctgagctcgttcagt
gctgataacctggcggccacggatgatgacagcgagatgaacaatctgacggtggccata
ggccgcatccaccagggcatcgcctttgtcaaggccttggtgtgccgctccttccacagc
atctgtctgaggaaaaagaaggggagcctgaacgaggacaagcccctggatgacctccac
agaaccaactacaactccaaccacaccactggggagatcatgaaagaccctgaatacgtg
aaggatgacaatggcaccaccggtggggtaggaatgggagtgggtagcaatgcagcaggg
aagtacatagtcaacgacaacactgactacatgcagttcatccacaaccccagtctgact
gtcacggtgcccatcgctgtgggggagtcggactttgaaaacctcaacactgaggacttc
agcagcgattcctcggacatagagggaagcaaagagcaactaggtaaagaccgtccactg
agctcatcagagggaagtacagtggacatcaggcccccaggagagagagagggctcggtg
gacatggagcctgaggagtccatggaagctgaaggatgcttcactgatggctgtgtccgt
agattccaatgctgccaagtgaacgttgaggagggcaagtggaagatgtggtggacattg
aggaagacctgcttcaggatagtggagcacaactggtttgagagctttatcatcttcatg
atcctgctcagcagtggagcgctggcatttgaggacatctacatcgaacagaggaagacc
attaagacggtgttggagtttgcggacaaagtcttcacctacatcttcattctggagatg
ttgctgaaatgggtagcctatggatttgccaaatacttcaccaacgcctggtgctggttg
gactttcttattgttgacgtctctttggtcagccttgtggccaacgccctgggctactct
gagctgagtgccatcaagtccctgaggacgctgcgagcgctgaggcccctgagagcgctg
tcccgcttcgagggcatgagggtggtcatcaacgctctgcttggagccatcccctccatc
ttcaatgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggtgtcaac
ctgtttgcagggaaatactaccattgtatcaacatgaccacgagggagcgcttcgaagtc
agagacgtggcaaacaagacagaatgtttggctttgaaaggtacccactggaagaatgtc
aagatcaactttgataacgtgggagcaggctatctggcactgttacaagtggctacattc
aaaggctggatggatatcatgtatgcagctgtggactctcgcaatttggatgatcaaccc
gactacgaagtgaatctgtacatgtatctgtactttgtggtattcatcatatttggatcc
ttcttcacactcaacctcttcattggtgtcattatagacaacttcaatcagcaaaagaaa
aagtttggaggtcaagacatcttcatgacagaggaacagaagaaatactacaatgctatg
aagaagctcggctcaaagaaaccccaaaagcctatccctaggccagtgaacaagtttcaa
ggatttgtttttgatttcattacaaagcaagccttcgacattgtcatcatgattcttata
tgccttaatatggtcaccatgatggtggagacggatgaccaggaaaacgacattcgtaaa
attctctacaatatcaacctggtgtttattgtcatgttcaccggagagtgtattctgaag
atgatctcactccgacaatactactttaccattggctggaatgtatttgactttatcgtt
gttatcctgtcgataattggtatgtttctctcggaagtgatagagaagtacttggtttca
ccaaccttattccgagtcattcgactggcccgaattggccgtatccttcgcctcatcaag
agtgccaagggaatccgtacactcttgtttgcgttgatgatgtcacttcctgcattgttc
aacattggtcttctgctcttcttagtgatgtttatctatgcaatctttggcatgtccaac
tttgcatacgtcaagaaggagtctgggattgacgacatgttcaactttgaaacgttcggc
aacagcatgatctgcctgttccagatcaccacgtcagggggctgggatgtcctgctggcc
cccatcctcaacaagggagagccagactgcgacagccggaaagagcacccaggaagcacg
tacaaggggggagactgtggaaacccctctgtggccattatcttctttgtgagctacata
atcatatgtttccttgttgtggtcaacatgtacattgctgtcatcttagagaacttcagt
gtggccactgaggagagcgctgagcccctgagtgaggatgactttgagatgttctatgag
gtctgggaaaagtttgatgcgcgggccacccagttcatgcagtatgacaagctgtcagac
tttgctgacgccctagaccccccgctacgcatctctaagcccaacaagatccagttgagc
tcaatggatttacccatggtgagtggggagcgcatccactgcctggacatcctgtttgcc
ttcaccaaacgtgtcctgggcgagggcgaaggcttggacatcctccggggtcaaatggag
gagcgctttatggcctccaacccctccaaggtgtcctacgaaccaatcaccaccacactg
cgccgcaagctagaggacatgtctgccctggtcatccagagagctttcagacgatatctt
ctcaagcgtattgttaagcgggcctctgccatgtacaaggagaagatacaaagtggaggc
acgctccttgataaagaggttctcgtcatagacaaatttaacgagatctctaattcagac
agaactgacatgacaccctccacagcttctcccccatcatatgacagtgtcacaaaacct
gaaaaaaacaaatatgaaaaagacaagagaaagaaggaggtgaaggagaaaaaaaagtac
atggatgttgggaagatttag
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integrated database retrieval system
