Oncorhynchus masou masou (cherry salmon): 135522785
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Entry
135522785 CDS
T10723
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135522785
04082 Neuroactive ligand signaling
135522785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135522785
Ion channels [BR:
omm04040
]
Ligand-gated channels
GABA-A
135522785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
135522785
NCBI-ProteinID:
XP_064805450
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Position
30:complement(54368361..54387774)
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AA seq
475 aa
AA seq
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MNAVLLAVAWLCLVWAVTWPVTTVTGIRNPGRRRHKDVYVGEHSKNKHRGRIDHKLMRQD
STKSLLIKTEQLLRIEEHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRH
YWKDERLAFPSRSNVSRTFDGRLVKKMWVPDVFFVHSKRSFIHDTTMENIMIRVYPDGSI
LYSVRITVTALCSMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEMVLSQ
FFIKKFHPSSGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVLLSWVSFWIDR
RAVPARVSLGITTVLTMSTIITGVSSSMPQVSYVKAVDIYLWTSFLFVFLSVIEYAAVNY
CSTLEEMRRLKRGKLPISYNTSKAMAFDGCFHDSDIELTPFPRLPTSMTSSHHRTPLQNP
EDPPIEGTRLRRQRSVQENVDLLLSNSYLIDSYSRMAFPLSYLLFNTIYWSMYSS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgtccttctggccgtggcgtggctgtgcttggtctgggccgtgacgtggcct
gtaaccacggtgacagggatccgtaacccaggacgacggaggcacaaagacgtttatgtg
ggggagcacagcaagaacaaacacagagggcgtatagaccataaactgatgcggcaggac
agcaccaagtctctactcattaagactgaacagctgctgaggatcgaggagcacgacttc
gctatgagacctggctttggaggtgcagccatccctgtaggcattgatgttcaggtggag
agcatcgacagcatttcagaggtcaacatggacttcaccatgactctgtacctgcgccac
tactggaaggatgagcggctggcgtttccatctcgtagcaacgtgagcaggacatttgat
gggcgtctggtgaagaagatgtgggttcctgacgtgttcttcgtccactccaagaggtcc
ttcatccatgacaccaccatggagaacatcatgatcagggtctatcctgacggaagcata
ctctacagtgtcaggatcacagtgactgctctctgctccatggacttcagcagcttccct
ctggacacacagaactgttcactggaactagagagctatgcgtataatgagaatgatctg
atgttgtattggaagaatggcaatgactctctgaggacagatgagatggttctctctcag
ttcttcatcaagaagttccacccttccagtgggctcgcattctacagcagcacaggttgg
tataacaggttgtatataaacttcatcctgaggagacatatcttcttcttcatgctgcag
acatatttccccaccatgctgatggttctgctgtcctgggtctccttctggattgacagg
agggctgtgcctgcacgtgtctccctaggtatcactacagtactgaccatgtcaaccatc
atcactggtgtgtcctcctccatgccacaggtgtcctatgtgaaggcagtggacatctac
ctgtggaccagcttcctgtttgtgttcctgtcagtgatagaatatgctgctgtcaattac
tgctctacgctggaggagatgagacgactgaagagaggaaagctcccaatctcgtacaac
accagcaaagccatggccttcgacggctgtttccatgacagtgacattgagctgaccccg
ttcccccgtctgccaacctccatgacctccagccatcacagaactccactccagaaccct
gaggacccacccatcgaggggacacgtctccgccggcaacggtcggtgcaggagaacgtg
gatctgctacttagcaacagctacttgatcgactcgtactcccgcatggccttccctctg
tcctacctcctattcaataccatctactggagtatgtactcctcctga
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