Oncorhynchus masou masou (cherry salmon): 135522817
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Entry
135522817 CDS
T10723
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135522817 (traf1)
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF2_zf
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-RING_UBOX
YtxC
DUF1664
Motif
Other DBs
NCBI-GeneID:
135522817
NCBI-ProteinID:
XP_064805544
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All DBs
Position
1:18177909..18189718
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AA seq
570 aa
AA seq
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MESSLKPTGNLHNDPSAPGENEYPSGFPQSICDDVPQQKYLCSNCNNVLNEARQTLCGHR
YCLACVSWLVSNNNNLVCKMCKEEDPSSESETSILTSDNLFSDSAINKEILELKVHCANQ
GCSWRSILKDFEEHQGQCEYALIPCNIGCGHMVLRKALACHLEKACPNNMSVCPACCHSL
RPIELQTHSCHSLGEEKADEKQRKGKSNPLPGSKGKEYCVFSEVGCTFKGTTEKLRVHEN
SSHVGHLQLLLRAATTSSSDLQASPLTAPAPGKENRAMDEQLPHLRDTLSGLRLHWDMGL
LKGEGELETEGGDGRNSSAAHSLRDDDQVTILLDLGRQIDTLQQRVQISENIISVLNREV
EKTQLSMKAVERENQSNQEMIYHLEIKVTEQEHRMARKDLVISSMKQCLSAHQEVSYDGT
FIWRLSDLSTKMKEAVSSHGNRPNLYSPAFYTARYGFKVCMRLYLNGDGVGKGTHISLFF
VIMKGEYDLLLSWPFKHKVTFFLLDQNHREHVIDAFRPDLTSSSFQRPVSDMNVASGCPL
FFPLGKLHSPKHAYLKDDTIFIKCVVDTSS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagtctagtttaaaaccgactggcaacttacacaatgatccatctgcaccaggtgaa
aatgagtatccttctggatttcctcaaagtatttgcgatgatgtaccccagcagaagtac
ctgtgcagcaactgtaataacgtactgaatgaggcacgtcagactttgtgcggccaccgc
tactgcctcgcttgtgtcagttggttagtgagtaataacaacaaccttgtttgcaagatg
tgcaaagaagaagatccaagctcagagagtgaaacaagcatactgacatcagacaattta
ttcagtgattcagccatcaataaggagatcttggagttgaaagtgcattgtgctaaccaa
ggttgctcctggaggagtattctcaaggactttgaggagcaccaggggcagtgtgagtat
gccctaatcccctgcaacataggctgtggtcacatggtgctgcgaaaggccttggcctgt
cacctggagaaggcctgtccaaacaacatgtcagtgtgccccgcatgctgccactctttg
cgccccatagagctacagacacactcatgtcacagtcttggagaggaaaaagcggatgaa
aaacaaagaaagggaaagagtaatcctcttccaggttccaaggggaaagagtattgtgtt
ttctctgaagttggttgcacatttaaggggaccacagagaagctgagagtgcatgagaac
agcagccatgttggccaccttcagctcctgctgcgtgctgcgaccaccagcagcagtgac
ctgcaggcctccccactaacagcccctgccccaggcaaggagaacagggctatggatgag
cagctgccccatctcagagacactctgtctggcctgagactccattgggacatgggacta
ttaaagggggaaggggagctggagacggaaggaggggacggaaggaatagctcggcagct
cacagcctgcgagatgatgaccaggtgaccatactcttggacctagggcggcagatagac
acactgcagcagagggtccagatatctgagaacatcatctccgtcctgaacagggaggtg
gagaagacccagctgagcatgaaggctgtggagagggagaaccagagcaaccaggaaatg
atttatcacttagaaataaaggtgacagagcaggagcatagaatggccaggaaagatctg
gtcatcagctccatgaaacaatgtctcagcgcccaccaggaggtctcttatgacggcacc
ttcatctggaggctgtctgacctcagcaccaaaatgaaggaggccgtctctagccatggg
aatagaccaaacctgtactctccagcgttctacacagccaggtatggattcaaggtgtgc
atgaggctgtacctgaatggtgacggggtgggaaaaggcactcatatctctcttttcttt
gtgatcatgaagggggagtatgacctactcctctcatggccattcaagcacaaggtcacc
ttcttcctgcttgatcagaatcacagagaacacgtgattgacgccttccggcccgatcta
acctcctcatccttccaaaggcctgtctctgatatgaatgtggccagtggctgcccactt
ttcttccctcttggtaaacttcactcgcctaagcatgcctacttgaaagacgacacaatc
ttcatcaagtgtgttgttgacacttcatcctga
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