Oncorhynchus masou masou (cherry salmon): 135522818
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Entry
135522818 CDS
T10723
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135522818 (rnf6)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135522818 (rnf6)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135522818 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-P11
zf-RING-like
Prok-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
135522818
NCBI-ProteinID:
XP_064805509
LinkDB
All DBs
Position
30:complement(55410896..55417054)
Genome browser
AA seq
726 aa
AA seq
DB search
MVMDPPSGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQR
LDGAKERVSSQPRPEPLPQNTEAGEEEGSSVEGEESEGGAATAEPGAETSNGDSLLEWLN
TFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDAPDPSELS
PVPPPSTASSASIRTAPYTPARPSPYPLPRATQGRRAQIRRTRSSTTIPLTPAPLITPLP
PPTALSSTAALNLPPPPVPITPLILQDQISPPQLQPPSSASSPGEGQDEGVPTLDFPRVP
PQSVPQVASVGREPRSSRTRSRGRTRRAAAGGGTTSRSSRRRSRSPLQRNPAPNSAILPP
SGGNGNGVSNNGHTAEPGNRTASVSMETGEAVSEPAVLAEPGPEAGEQEGEAHSAGSGGA
GGVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADAETTE
GTPGHQDPAGPNANTNTTQTYHSHSNESGTVAGGQAGETETEREGGGDEEEGVHGRLGGS
DNSGIPTPDDGRPMSRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDILAT
RTYGQASLEGEAGRACSVCINDYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPI
LPAHQD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaccctcctagcgggcgagacgagcggcggcgtcaagcagagcgtcttcga
agggaggaggcgtactatcacttcatcaacgagctgagtgaggaagagtaccgccttatg
agagacagcaacctgctgggcacacctggtgaggtgacagcggaggagctacggcagcgc
ctagacggggcaaaggagcgtgtgtcatctcagccccgccctgaaccactcccacagaac
actgaggccggagaggaggaggggagcagcgttgagggggaggagagcgagggaggggca
gctactgctgagcccggagcagagacgtctaacggtgactcactgctggagtggctgaac
accttccgacgcacagggaacgccacgcgcagtggccagagcggcaaccagacgtggcgc
gcggtcagccgcaccaaccccaacagtggagagttccgcttcagcctggagatcaacatc
aaccatgagcagccagagccaggggagcacagtgatgccccagacccctcagagctgtcc
cctgtcccccctccatccacagcctcctcagcctccatacgcactgccccctacactcct
gcccggccctccccctatcccttacctcgagccacccagggcaggagggctcagatccgc
cgtacacgcagtagtaccaccatccctctgactcccgcacccctcatcacacccctgccc
ccccctactgctctaagcagtacagcagccctcaacctcccaccacccccagtacccatc
accccccttatccttcaggatcaaataagccctccacagctccaacccccaagcagtgct
tcctccccaggggaggggcaggatgagggggttcctaccctggacttcccccgtgtaccg
ccccagtctgtcccccaggtggcgtctgtggggcgtgagcctcgtagcagcaggactcga
tctcgcggccggacccgcagggctgcagcaggaggtggaactacctcccggtcgtctagg
agacgcagccgctcccctcttcagagaaaccccgcccctaactcggctatcttgcctcct
agtggtgggaatggaaatggtgtctctaataatggccacactgctgagcccggaaacaga
actgcttctgtctccatggagaccggtgaggccgtgtcagagccggctgtactagcagag
cctggcccagaggcaggtgagcaggaaggagaggcacactcggccgggtcggggggtgca
gggggggtgcggcgccaccccaccatcatgctggatctgcaggtgcggcgcatccgaccg
ggagagaaccgggaccgggacagcatcgccagccgaacccgttcccgggcccgcgccgcc
gagaacactgtcaccttcgagagcgacagcgggggcttccggcgcacaatctcccgctcg
gagcgagccgggatccggacctacgtcagcaccatccggatccctctgaggaggatcagc
gagactggattgggggagcccagctccaccgccctgcgctccatcctcagacagatcatg
accggcttcggggagctcagctccctcatggagacggaggctgacgctgagaccaccgag
ggtactcccggtcaccaggaccctgcaggacccaatgctaacaccaacaccacacagacc
taccatagccacagtaatgagagtggaactgtggcgggaggccaggcaggagagacagag
actgagagagagggggggggtgatgaggaggaaggagtgcatgggaggttaggtgggagt
gacaacagtggaatcccaacccccgacgacggtcggccgatgagcagggatacaaacaac
ctggtagagaacggcacgctgcccatcctgcggctggcccacttcttcctgctcaacgac
gaggaggacgaggagcacccgcgcggcctgaccaaagagcagattgacatactagccacg
cgcacctacggccaggccagcctggagggggaagcggggcgcgcctgcagtgtctgtatc
aacgactatgcccaagggaacaagctgcgccgcctgccctgcgcccacgagttccacatc
cactgcatcgatcgctggctctctgagaacaacacctgccccatctgcaggcagcccatc
ctccctgctcaccaggactga
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