Oncorhynchus masou masou (cherry salmon): 135526454
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Entry
135526454 CDS
T10723
Name
(RefSeq) protein transport protein Sec24B-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135526454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135526454
Membrane trafficking [BR:
omm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135526454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
DUF3246
HpaB
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
135526454
NCBI-ProteinID:
XP_064810913
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Position
32:63749537..63785662
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AA seq
1192 aa
AA seq
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MSAPGYTSLKTSLGHSLNSTPNGGAAPPYQNGPGGQTYPSTYPLTGYYGAGPQQQGNPTI
PGQCAAAPQKAQITNNDHSAYCHQQPLQPTAAPTVAPSAYGATQGSHPPSLPYGTPTTLP
TSAALPNPQHAPSFQQPAPYAQPGAYYGQQQYPTSQTQHHSQQPNLVLAPPTSPGAPLYP
IVSYPSVPGSSQYGTLRSSQAPTGPAAVPNLMGAPLHQYAPGNDTSHPASTAAVPPGYSM
APPGQPATVNGQGNAAPVLQHYDQSHHAPMTHDHYRGGVTQNTGGADRDMPPLGIPSTSV
NSSPGHQQGMHYGYLANSGASSANAAANVAPSSSSSDEDDDEEEEDEEAGGDSSSTTTGS
ASPVPNSYDSLEGGSYPEFSNPPSADMPNQPVYQQRPVSRTDSSPSHGGYNQTGYQHLPQ
PFPNMSQLSAALGGLSGVPELEVEALRPVNLLQERNLLPHQPLDAPEPNLSADLKKANCS
PDTFRCTLTNIPQTQALLNKARLPLGLLLHPFRDLAQLPVITSNTIVRCRSCRTYINPFV
SFLDQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQ
PAVYLFVLDVSHNAVEGGYLNVYCHTLLENLDKMPGDTRTRVGFITFNSTIHFYNLHESL
SQPQMLVVSDIDDIFIPTHDSLLVNLKESRALVRVLLTSLHSMFSQTRETHSALGPALQA
AYKLMSPTGGRVSVFQTQLPTLGPGLLQSREDPNQRSSTKGVQHLGPATDFYKKLALDCS
GQQIGVDLFLLSSQYSDLASLACMSKFSAGSIFYYPSLHHVHNPAQLDKFQKDLERYLTR
KIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANINPDSGFAVQMSIEESLADTSLA
CFQSALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADVQAITCLLANMAIDRSISSSLS
DARDALVNAVVDSLSAYKNTVSNIHQSGLIAPAALCLFPLYVLALLKQKALRMGTSTKLD
ERVFAMCEFKSQPLQQIMRAVHPDLYRLDTMSDQGALHLNDCIVPQPHLLHLTAEKLTRE
GAFLMDCGSVFYLWIGKCCNDVFIRDVLGCPNHASIPPSMAQIPELETPLSERLRALLAW
LQDSRPFSSTLHVVKDDATAKTSFFQHLVEDRSESALSYYEFLLHIQQQMSK
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccgggttatacgagcctgaaaacctctctcggtcacagcttgaattcaacg
ccgaatggtggagcagcacccccctatcagaatggtccaggggggcagacttacccatcc
acatatcctttgacggggtactatggagccgggcctcaacagcagggcaacccaaccatt
ccaggccagtgtgccgctgccccccaaaaagctcaaatcacaaacaatgatcacagtgct
tactgccaccagcagccgctgcagcccactgctgcacctactgtagccccctctgcatac
ggagcaacccaaggttcccaccctccctctctgccctatggcacccccaccactcttccc
acctccgctgcccttccaaacccccaacatgcaccttcattccaacaaccagccccatac
gcacagcctggggcctactatggacagcagcagtaccctacctcccaaacgcaacaccac
tcccagcagccaaacttggttttggcaccccccaccagcccaggtgctcccctgtatccc
attgtctcgtacccctctgttccgggaagcagccagtacggtacattgcgttcctcccag
gctcccaccggcccagcagctgttcccaacctgatgggcgctcccctccaccagtacgcc
ccaggaaatgacaccagtcacccagcatctactgcagcggttccccctgggtatagcatg
gctccacccggccaaccagccacagtcaacggccagggtaatgcagccccagtcctccag
cactatgaccaaagtcaccatgcacccatgacacatgaccactacagaggaggagtcaca
caaaacactgggggtgctgacagggacatgccacctttaggaatcccatccacttcagtt
aattcctccccagggcatcagcaaggcatgcactacggatatttagccaatagtggcgct
agctctgccaacgccgccgccaacgttgccccctcgtcatccagctccgatgaggatgat
gatgaggaggaggaggatgaggaagcaggcggggatagttcctcaaccaccactggcagt
gcgtccccggtgcccaacagctacgactccctggaaggcggcagctacccagagttctcc
aatccaccgtctgctgacatgcccaatcagccagtctatcagcagaggccggtctccagg
acagactcctccccttcacatggcgggtacaaccaaactggctatcagcatttgccacag
cccttccctaacatgtcccagctgtctgcggccctcgggggactgagcggtgtaccagag
ctggaggtggaggcgctgcggccggtcaacctgctgcaggagaggaacctgctgccccac
cagcccctggatgccccagaacccaacctcagcgctgacctaaaaaaggccaactgcagc
ccggacacgttcaggtgtaccctgaccaacatcccccagacccaggccctgctgaataaa
gcccggcttcccctaggcctgctcctgcaccccttcagagacctcgcacaactcccagtg
atcacgtccaacaccatagtgagatgtcgctcctgtcgcacctacattaaccccttcgtc
tccttcttggaccagaggagatggaaatgcaatctctgttacagggtcaacgatgttcct
gatgagtttatgtataacccagtgacccgctcatatggagagccccacaagaggccagag
gtacagaactccactgtggagttcatagcctcttcagattacatgctgcgtccccctcag
cctgcagtgtacctgtttgtgctggatgtgtctcacaacgcggtggagggaggctacctg
aacgtctactgtcacaccctactggaaaacctggacaagatgcctggggacacgcgcacc
cgagttggcttcatcaccttcaacagcaccatccacttctacaacctccacgagagcctc
tcacagccccagatgttggtggtctctgacatcgacgacatcttcattccaacccacgac
agtctcctggtgaacctgaaggaaagcagagcgctggtgagggtactgttgacctcccta
cacagcatgtttagccagaccagggagacccacagtgccctgggcccggcgctgcaggct
gcctacaaactcatgtcccccacggggggccgcgtctccgtgttccagacccagctaccc
acgctgggcccaggcctgttgcagtcccgggaagaccccaaccagaggtccagtaccaag
ggtgtccaacacctgggcccagccacagacttctacaagaagctggccctggactgttct
ggccaacagataggagtggacctgttcctcctcagctcccagtactctgacctggcctca
ctagcctgtatgtctaagttctcagcgggcagtatcttctactacccctcgttgcaccac
gttcacaacccggcccagctggacaagttccagaaggatctggagcgctacctcaccagg
aagatcggcttcgaggccgttatgaggatacgctgcaccaaaggcttgtccatccacacg
ttccacgggaacttctttgtgcgctcgacggacctgctgtccctggccaacatcaaccca
gactcgggcttcgccgtgcagatgtctatagaggagagcctggccgacacctcactggcc
tgcttccagtctgcgctgctgtacacctccagcaaagggaagaggcggatcagggtccat
actctgtgtctgccagtggtgagccagcttagtgatgtatatgccggggctgacgttcag
gccatcacctgcctcctagccaacatggccattgaccggtcgatatcgtcaagcctgtca
gatgcccgggatgccctggtgaatgcggtggtggactctctgagtgcatacaagaacact
gtatctaatatccatcagtctggtcttatcgcccctgcagccctgtgtctcttccccctc
tacgtgctggcactactcaaacagaaagcactgcgcatggggaccagcaccaagcttgac
gagcgtgtcttcgccatgtgtgagttcaagagtcagccgctacaacagatcatgcgtgcg
gtccaccccgacctctaccgcctggacaccatgtcagaccagggggctctccacctgaac
gactgcatagtgccccagcctcatttgctgcacctcacggctgagaagctgaccagagaa
ggagcgttcctcatggactgtggcagcgtcttttacttgtggattgggaaatgctgtaat
gatgtgttcattcgggacgtgttgggatgcccaaaccatgcttctataccccctagcatg
gcccaaattcctgagctggaaacccctctgtctgaacgactgcgtgcactcctcgcctgg
ctacaggactcgagacccttcagctcaactcttcacgtcgtgaaggacgatgctacagcg
aagaccagctttttccagcacttggtagaggaccggtcggagtcggccctctcctactac
gagttcctgctccacattcagcaacagatgtccaagtag
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