Oncorhynchus masou masou (cherry salmon): 135528494
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Entry
135528494 CDS
T10723
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04260
Cardiac muscle contraction
omm04261
Adrenergic signaling in cardiomyocytes
omm04270
Vascular smooth muscle contraction
omm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135528494
04020 Calcium signaling pathway
135528494
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
135528494
09153 Circulatory system
04260 Cardiac muscle contraction
135528494
04261 Adrenergic signaling in cardiomyocytes
135528494
04270 Vascular smooth muscle contraction
135528494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135528494
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135528494
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
135528494
NCBI-ProteinID:
XP_064813682
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All DBs
Position
33:38553130..38601432
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AA seq
1890 aa
AA seq
DB search
MASSGEPAMAALTSFIMNEEELKRKQRDKLKKMQATGGNPRPARSLFFFTLKNPFRKACI
NIVEWKPFEIIILLTIFANCVALAVFLPMPEDDNNATNTSLESLEYIFLVIFTLECFLKI
IAYGFVFHEGAYLRNAWNLLDFVIVFMGLFTIALDTINYLAGIHMEKGGGLDMKALRAFR
VLRPLRLVTGVPSLQVVMNSILKAMLPLLHIGLLVFFMVTIYAIVGLELFKCKMHKTCYW
TGTDIMATLENERPAPCAQAGNGRRCLLNGTECRSGWAGPNFGITHFDNFGFAMLTVFQS
ITMEGWTDVLYWVNDAIGNEWPWLYFVTLILIGSFFVLNLVLGVLSGEFTKEREKAKSRG
EFQKLRETQQLDEDLKGYMEWITQAEVLENDQEGKGLLPLTEADTDSLIGKESESRVVYY
YRQARRWNRFFRMKCLVYVKSKTFYWSVILVVFLNTIAIASEHHHQPDMLTTIQDNANKV
LLTLFALEMFVKMYALGLPQYFLSLFNRFDCFVVSMGILEIILVTADVMSPLGISVLRCI
RLLRLLKVTKYWTSLSNLIASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFPDQ
EIRRSNFDNFPQALISVFQVLTGEDWNSIMYNGIMAYGGPVFPGILVSIYFIILFTCGNY
ILLNVFLAIAVDNLAEAESLTAAQKDKAEERKRRRLLRANMPDKADEERVLLAKKLAEQR
AKIEGIPTTAKLKVDEFESNVKEVKDPFPSADFPGDDEEEEPAIPESPRPRPMADLQLKE
EEVPMPETYSFFIFGPENKFRKLCHRIVNATPFTNFILLFILLSSISLAAEDPIDPKSFR
NKVLAYADIVFTTVFTIEIVLKMTVYGAFLHPGSFCRNSFNMLDLLVVGVSLLSMGMESS
AISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFIFSCIGVQ
LFKGKFYTCSDPSKMTEVTCRGVFLEHQENSLQEMVVAHREWINSDFNFDNVLNGMLALF
TVSTFEGWPQLLYKAIDSDREDMGPVYNNRVDISIFFIVYLILIAFFMMNIFVGFVIVTF
QEQGESEYKNCELDKNQRQCVQYALKAKPLRCYIPKNHYQYNMWYIVTSCYFEYAMFFLI
MLNTLCLGMQHCNQSAHVTKLSDTLNMIFTVLFTVEMILKLIAFKAKGYFGDPWNVFDFL
IVIGSVVDVILSEVDAALASSGGLYCLHGCAQTNAMQAIADSENARVSITFFRLFRVMRL
VKLLNRSEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVDGTQINRN
NNFQTFPQAVLLLFRCATGEAWQEVMGASMYGKKCDPKSDFLPGEEYTCGASFAVFYFMS
FYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPDATGRIKHLDVV
TLLRRIQPPLGFGKFCPHRSACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTEGVE
GNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDHFRKFMKRQ
EEYYGYRPTKKSANGSAPEMQAGLRSIEEEVAPELHRAISGDLLNEEEMERAMEESLEEG
IYRRQGGLFGDYSDPFSTETNSVSPSHMASQRPLQLSENSPEEAVLPLSRSDSVFLPNTE
FFPLTPTKHNSNNNAFSYEREESPKVSRHHSRVDTERSSPDSRHFSEISQKPIRTDITQF
PYDLKYGESQSLPSCSQAKGEATEEAEGATGGSVSAPAADQLIKEVLVVGGLGDLANDNS
FVAVTRNEMAEAMRMPMSHFEDVALGLLNGRSGRATSATRKKSPIPVPPSAPDRPSRSAE
LKPKPQEQRKKRLVKTFKQPLKGEEADTKV
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcggtgagccggcgatggctgcgttgacgtcgttcatcatgaacgaagag
gagctgaagaggaagcagagggataagttgaagaagatgcaggcgacggggggtaaccct
cgccccgcccgatccctcttcttcttcactctcaaaaaccccttcagaaaagcctgcatt
aacatcgtagagtggaaaccctttgagatcatcatcctgctgaccatctttgccaactgt
gtggccttggctgtgttcctacccatgcctgaagacgacaacaacgctaccaataccagc
ctggagagtctggagtatatcttcctggtgatctttacgttggagtgctttctgaagata
atagcgtacggctttgtattccacgagggagcctatctgcggaacgcttggaacttactg
gacttcgtcattgtcttcatgggcctcttcaccatcgccctggacaccatcaactatcta
gcaggaattcacatggagaagggaggagggttagatatgaaggccctcagagcattcagg
gtgctcaggcccctacgtctcgtaactggagtccccagccttcaggtggtgatgaactct
atcctgaaggcaatgctgcccctgttgcacattggcctgctggtgttcttcatggtcacc
atctacgccatcgtaggtctggagctctttaagtgtaagatgcacaagacctgctactgg
actggcacagacatcatggctacattagagaacgagaggcccgccccctgtgcccaggcc
ggtaacgggcgccgctgcctcctcaacgggacagagtgtcgttcaggctgggcggggcca
aacttcggcatcacccactttgacaactttggtttcgccatgctcaccgtcttccagtct
atcactatggagggctggaccgatgtgctctactgggtgaacgatgccatagggaacgag
tggccctggctctacttcgtgactctgatcctaattggatccttcttcgtgctcaatctg
gtcctgggtgttctcagcggagagttcactaaggagagagagaaggctaagtcccgaggg
gagttccagaagttgagggagacccagcagctggatgaggacctgaagggttacatggaa
tggatcactcaggctgaggtcctagaaaacgaccaggaggggaaaggactcctgcctttg
acggaggcagacacagacagtctgatagggaaggagagtgagagccgggtggtgtactat
tatcgtcaggctcgtcgctggaaccggttcttcaggatgaagtgtctcgtctatgtaaaa
tcaaagacattttattggtctgtgattctggtggtcttcctgaatactattgccatcgct
agtgaacatcaccaccagccagacatgcttactactatacaagataatgccaacaaggtg
ctgctgaccctgtttgcgctggagatgtttgtgaagatgtacgctctgggcctgcctcaa
tactttttgtccctgttcaaccgcttcgactgcttcgtggtgagcatgggtatcctcgag
atcatcctggtcactgctgacgtcatgtcccctctcggcatctctgtcctccgctgcatc
cgcctgctgagactgctaaaggtcaccaagtattggacctccctcagtaacctgattgcc
tccctgttaaactcagtccgttccatcgcctcgctgctcctcctcctcttcctcttcatc
gtcattttctccctgctgggcatgcaggtgttcggggggaagttcaacttcccagaccag
gagatcagacgcagtaactttgacaacttcccccaggcgctcatcagtgtcttccaggtt
ctgacaggggaggactggaactccatcatgtataatggtatcatggcttacggtggacca
gtcttccctggcatcctagtcagcatctacttcatcatcctcttcacctgtggaaactac
atcctcctcaacgtgttcctggccatcgctgtcgacaacctggcagaagcagagagcctg
acggccgcccagaaagacaaagcagaggagagaaagaggcggagactgctcagggccaac
atgccagacaaggctgatgaggagagggttctgctggctaagaaactggctgaacagagg
gctaagatagaggggattcccaccactgctaagctgaaagttgatgagtttgaatccaac
gtgaaggaagtgaaggatcccttcccttcagcagacttcccaggtgatgacgaggaggag
gagcctgctatccctgagagcccacggcctcgaccaatggctgatctccagctgaaagag
gaagaggttcctatgccggagacctactccttttttatcttcggaccggagaacaagttt
cgtaagctgtgtcataggattgtcaatgccacccccttcaccaacttcatcctgctcttc
atcctcctcagtagcatatcactggccgctgaggatcccatagaccccaagtcattcagg
aataaggtcttggcttatgctgatattgtcttcaccactgtgttcaccattgagattgtg
ctgaagatgacggtgtatggagccttcctgcatccaggctctttctgccgtaactccttc
aacatgctggacctgctggtggtgggcgtgtctctgttgtccatgggaatggagtccagt
gccatctcagtggtgaagattctcagggtgttgagggtgctgagacctctaagggctatc
aacagagccaagggcctgaagcacgtggtccagtgtgtgtttgtagctatcaaaaccatc
ggcaacatcgtcctggtcaccatgctgctcgacttcatattctcctgcataggggtccag
ctcttcaagggtaaattctacacttgctcagacccttccaaaatgacagaggtcacgtgc
cggggtgtgttcctggagcaccaggagaacagtcttcaggagatggtggtggcccacagg
gagtggatcaacagtgactttaactttgacaacgtcctcaacggcatgctggctctgttt
accgtgtccacgtttgaagggtggccacagctgttgtataaagccatagactcagacagg
gaggatatgggcccagtctacaacaaccgtgtggatatctccatctttttcatcgtctac
ctcatcctcattgccttcttcatgatgaacatctttgtcggcttcgtcatcgtcaccttc
caggagcagggagagtctgagtataagaactgtgagctcgacaagaaccagcgtcagtgt
gtgcagtatgctctgaaggccaagcctctgcggtgttatatccctaagaaccactatcag
tacaacatgtggtacatagtcacctcctgctactttgagtacgccatgttcttcctcatc
atgctcaacacgctgtgtctcggcatgcagcactgtaaccagtcagcccatgtgaccaag
ctgtctgacactctgaacatgatcttcactgtcctcttcacggtggagatgatactaaaa
ctcattgccttcaaagctaagggctactttggagacccgtggaacgtgtttgacttcctc
atcgtcatcggcagtgttgtcgatgtcatcctgagtgaggtcgacgctgccttggcctct
agtggaggactgtactgtctccatggctgtgctcagacaaacgctatgcaggctattgcg
gattctgagaatgccagagtgtccatcacattcttccgtctgttccgtgtgatgcgtttg
gttaaactactaaacaggtcagagggcatccgtaacctgctgtggaccttcatcaagtcc
ttccaggctctaccctacgtggctcttctgatcgtcatgctcttcttcatctacgcagtc
atcgggatgcaggtgtttggaaagatagccttagtagatggcacacagatcaaccgcaac
aacaacttccagacattcccccaagctgtcctgctcctattccgttgtgcgacaggggag
gcgtggcaggaagtgatgggggccagtatgtacggcaagaagtgtgaccccaagtctgac
ttcctacctggggaggagtacacctgtggagccagcttcgctgtcttctactttatgtcc
ttctatatgctgtgtgccttcctgatcatcaacttattcgtagctgtgatcatggacaac
tttgactacctgacacgtgattggtccatcctgggtcctcaccatctggatgagttcaag
aagatctgggccgagtatgacccggatgccacggggcgtataaaacatctggacgtggta
acactactgcgaaggatccagcctccgctaggctttgggaaattctgtccgcatcgctca
gcctgcaagcgtttaatatccatgaacatgcccctgaacagcgatggcacagtcaccttc
aatgccaccctttttgccctggtcaggactgccctcaagataaagactgaaggtgtcgaa
ggtaactttgagcaggctaatgaagagttgagagccattataaagaagatctggaaacgc
accagtatgaaactgctggaccaggtcatcccaccaatcggagatgacgaggtgacggtg
ggaaagttctacgccaccttcctgatccaggatcatttccgtaagtttatgaagcgtcaa
gaagagtactatggctaccggcccaccaagaagagtgctaatgggagtgctccagagatg
caggctggtctgaggagtatagaggaggaggtagctccagagctccacagggccatctca
ggagacctgctgaatgaggaggagatggagagagccatggaggagtctctggaggaaggc
atctacaggcggcagggcggtctgttcggggactattcagacccgttctccacagagacc
aacagtgtctcgccctcccacatggctagccagcgtcccctacagctatcagagaacagc
cccgaggaggctgtgttgcccctcagtcgctcagactccgtcttcctccccaatacagag
ttctttcccctgacccccaccaaacacaacagcaacaacaacgcgttttcttatgagaga
gaggagagtccgaaagtgagcaggcatcattccagagtggacacagagcgcagctctcca
gatagcagacacttctctgagatcagtcagaaaccaatcagaacagacatcactcagttc
ccctatgacctcaaatacggtgagagccagtctctccccagctgttcccaagctaaaggg
gaggctacagaggaagctgaaggggccacaggaggctctgtgtctgcacctgccgctgac
cagctgatcaaagaggtcttagtggttggcggtcttggcgacctggccaatgacaattcg
tttgtggcggtgactcgtaatgaaatggccgaggcaatgcgcatgcccatgtcccacttt
gaagacgtggccctgggcctcctcaacgggcgcagtggccgcgcaacctccgccacaagg
aagaagagcccaatccccgtgcccccttccgcccccgaccggccctctaggtctgcagag
ctgaaaccgaaaccccaggagcagagaaagaagcgcctcgtcaaaacctttaaacaaccc
ctgaagggggaagaggcagacaccaaagtgtag
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