Oncorhynchus masou masou (cherry salmon): 135530524
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Entry
135530524 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1C-like
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04260
Cardiac muscle contraction
omm04261
Adrenergic signaling in cardiomyocytes
omm04270
Vascular smooth muscle contraction
omm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135530524
04020 Calcium signaling pathway
135530524
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
135530524
09153 Circulatory system
04260 Cardiac muscle contraction
135530524
04261 Adrenergic signaling in cardiomyocytes
135530524
04270 Vascular smooth muscle contraction
135530524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135530524
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135530524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135530524
NCBI-ProteinID:
XP_064814902
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MQLFGGKFNFDETRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGASFPGMLVCI
YFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKRHVNE
KPPIIEVEEKKEEKIELKSITSDGETTNATKINIDEYQVDVNEEKNPYPANDFPGTTVPV
IKREDEDPEMPVGPRPRPLSDIQLKEKAIPMPEARAFFIFSNTNKFRVLCHKMVNHNIFT
NLILFFILLSSISLAAEDPVRNDSFRNQILGYADHVFTGLFTIEIILKMTAYGAFIHKGS
FCRNYFNILDLVVVSVSLISSGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVF
VAIRTIGNIVIVTSLLQFMFACIGVQLFKGKFFYCSDSSKSTEPECRGSYIMYKDGDVGK
PERSMRVWENSDFNFDDVLQGMMALFAVSTFEGWPALLYRAIDSHSEDLGPVYNYRVVVS
IFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYI
PKNQYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQTHSFNDAMNILNMLFTGLFT
VEMILKLIAFKPRGYFSDPWNVFDFLIVIGSIIDVILSEINGLQNSEDNARISITFFRLF
RVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALRDNS
QINRNNNFQTFPQATLLLFRCATGEAWQEIMLACAPMRPCEKGSEVGPASEDQCGSHFAI
FYFVSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIK
HLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIK
TDGNLEQANEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKK
RKEQGLVAKVPPKTALSLQAGLRTLHDMGPEIRRAISGDLTVEEDLDKSMKEPVSAASED
DIFRRAGGLFGNHVSYYNDGRDSGRNTFPQSFTTQRPLHISQTGSPGEGESPSHEKLMDS
TTFTPSSYSSSGSNANINNANNTAVPGVVVGVGGPGGLSRFPSPSISTVDGQSGPPLTPI
LLPRSAWCFPPKSSDSTDSRLPFIRREEEASTDETYDESYADEREYRRSDQNILTSDMLV
YQDEENKQLTPMEDGEDGGDRRPWHSPRRAFLCPTALGRRSSFHLECLRRQTRADVSQKT
VLPLHLVHHQALAVAGLSPLLRRSHSPTLFTQLCSTSPTSPTSRGSQASYQRVPTLRLQG
TGPGTGSYELNSSLPSVNCGPWYSDSNGNSPGISPRVGTANQRPPRPVSLTVPSTVHKDA
TSLSHGSAGSLVEAVLISEGLGHFAQDPSFIEVTKQELADACDMTIEEMENAADNILNGN
SQPSPNGNLLPYMHCNRDHAASQEPGLSDGPGPVGATAPGEIEELLGATHLGQHGDPEDE
EGLEVVGGEEEHTGGVEVVVEVGQRNSGLLEDEDMECVTSL
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcttcggaggcaagttcaacttcgacgagacgcgccggtcaaccttcgacaac
ttcccccagtcgctgctcaccgtctttcagatcctgacaggtgaggactggaactcggtg
atgtatgacggcatcatggcctacggaggggcgtccttcccagggatgctggtctgtatc
tacttcatcatcctgttcatctgtggaaactatatcctcctgaatgtcttcttggccatc
gccgtggacaacctggctgatgctgagagtctgacgtcagcacagaaggaagaagaggag
gagaaggagaggaagaagctggccagaacggccagtccggagaagcgtcatgtcaacgaa
aagcccccgataatcgaggtagaagagaagaaggaggagaagattgagctgaagtccatc
acctcagacggagagacaaccaatgccaccaagatcaacattgatgagtaccaagtagat
gtgaatgaagagaagaacccgtatccagctaatgattttcccggtaccactgtaccggtg
ataaaaagagaggatgaggaccctgagatgcctgtgggcccccggcctcggcccctgtct
gacattcagctgaaggagaaggctattcccatgcctgaggcccgggctttcttcatcttc
agcaacaccaacaagttcagggttctgtgccataagatggtgaaccacaacatcttcacc
aacctcatcctgttcttcattctactgagcagtatctctctggcagcagaggaccctgtc
cggaacgactccttcaggaaccagatattaggctatgcagaccatgtcttcactgggctc
ttcaccatagagatcattctgaagatgacagcgtacggggcgttcatccataagggttcg
ttctgtcggaactacttcaacattctggatctggtggtggtcagcgtgtcgctcatctcc
tctggaatacagtccagtgccatcaacgtggtgaagatccttcgtgttctcagagtgctt
cggcccctgagggctatcaacagggccaagggcctcaaacatgtggtccagtgtgtgttt
gtggccatccgaaccatcgggaacatcgtgatcgtcacctctctgctgcagttcatgttc
gcctgcatcggagtacaactcttcaaggggaagtttttctactgctcagacagctccaag
tctacagagcctgaatgcaggggttcatacatcatgtataaggacggggatgtggggaag
ccagagaggtccatgcgtgtctgggagaacagtgacttcaactttgacgacgtgctccag
gggatgatggctctgttcgctgtctccacctttgaaggatggccagcactcctgtaccgg
gccatagactcccattcagaggacctgggccctgtctacaactacagagtggtcgtgtcc
atcttcttcatcatctacatcatcatcatcgccttcttcatgatgaacatcttcgtcggt
ttcgtcattgtcacctttcaggagcagggagagcaggagtacaagaactgtgagctggac
aagaaccagcgtcagtgtgtggaatatgccctgaaggcccgtcccctacgtcggtacatc
cctaagaaccagtaccagtacaaggtgtggtacgtggtcaactccacctactttgagtac
ctgatgtttactctcatcctgctgaacaccatctgtctggccatgcagcatcacggccag
acccactccttcaacgatgctatgaacatcctcaacatgctcttcaccggcctcttcact
gtggagatgatccttaaactcatcgccttcaaaccacggggttactttagtgatccttgg
aatgtttttgacttcctcatcgtaattggcagcataatagacgtcattctgagtgagatc
aacggactacaaaactctgaagataacgccaggatctccatcaccttcttccggctgttc
agagtgatgaggctggtcaaactgctgtctcggggagaagggatacggaccctgctgtgg
accttcatcaagtcctttcaagccctcccctatgtagcactgctcatagtgatgctcttt
ttcatctacgccgtcattgggatgcagatgtttggtaagatagccctgagggacaacagt
cagatcaacaggaacaacaacttccagaccttcccccaggctacactcctgctcttcagg
tgtgccacaggcgaggcgtggcaggagatcatgctggcatgcgcccccatgcgaccctgt
gagaaggggtcagaggtgggaccagccagcgaagaccagtgtgggagtcacttcgctatc
ttctacttcgtcagcttctacatgctctgtgccttcctgatcatcaacctgtttgtggct
gtgatcatggataactttgactacctgaccagagactggtctattctaggacctcaccac
ctggatgagttcaagaggatctgggctgagtacgacccagaggccaagggtcgtatcaag
cacctggatgtggtaactctgttgaggaggattcagcctcctttgggcttcgggaagctc
tgtccccaccgggtggcctgcaagcgtctggtctccatgaacatgcccctgaacagcgat
ggcacagtcatgttcaatgccaccctgtttgccctggtgcgaacagcactgaggatcaag
actgatggtaacttggagcaggcgaacgaggagctccgggccatagtgaagaagatctgg
aagagaaccagtatgaagctgctggatcaggtggtgccccctgctggagacgatgaggtg
acggttgggaagttctacgccactttcctgatccaggagtacttcaggaagtttaagaag
cgtaaagagcagggcctggtggccaaggtgccgcccaagacggctctctccctgcaggcg
ggcctgcggacgctccatgacatgggtcctgagatccggagggccatatcaggtgacctc
acagtggaggaggacctggacaagtcgatgaaggagcctgtctcggctgcgtccgaggac
gatatcttcaggcgagcgggtgggttgttcggcaaccacgtcagctactacaacgacggg
cgcgacagcggacgcaacaccttcccacaatccttcaccacgcagcgcccgctccacatc
agccagacgggcagccccggcgagggcgagtccccgtcccacgagaagttgatggactct
accaccttcaccccgagctcctactcttcctcgggctccaacgctaacatcaacaatgcc
aacaacacggcggtccccggtgtggtagtgggggttggtggtccaggggggctcagccgt
ttcccaagccccagcatcagtactgtggacgggcagagcggacccccgctaaccccgata
ctactgccgaggtctgcatggtgcttccctcccaagagctcggactccactgacagccgt
ctgccgttcatcaggcgagaggaggaggcgtcgacggacgagacgtacgatgagagttac
gcggacgagagagaataccgccgaagcgaccagaacattctcacctcagacatgctggta
tatcaggatgaggagaacaagcagctgactcccatggaggacggagaggatgggggagac
aggagaccctggcactctcccagacgagccttcctctgtcccacagctctgggtcggagg
tcgtccttccatctggagtgtctgaggagacagacgagagcagatgtctcccagaagaca
gtactaccgctgcacctggtccaccatcaggcactagcagtagcaggtctgagccccctg
cttcgacggagccactccccgaccctcttcacgcagctctgctctacgtctcctaccagt
cccacaagccggggtagccaggcctcctaccagcgtgtgcccacccttcgtctccagggc
acgggccctggcaccggctcctacgagctcaactccagcctgccatcggtcaactgtggg
ccgtggtacagcgacagcaacgggaacagtcccggtatcagccctagggtgggtacggct
aaccagcggccgccgcggcccgtctccctcactgtgccgagcacagtgcacaaggacgct
acatcgttgtcccacggtagcgccggcagtctggtggaagctgtgctgatatcagagggc
ctgggccatttcgctcaggacccgtccttcatcgaggtgaccaagcaggagctggcggac
gcgtgcgacatgaccatcgaggagatggagaacgcagccgacaacatcctcaacggcaac
agccagcccagtcccaacggcaaccttttaccctacatgcactgcaacagggaccatgct
gcttcccaggagccaggcctcagcgatgggcctgggccggtcggggccacggcccctggg
gagattgaggagctactaggggccactcacctagggcagcacggggatccggaggatgag
gaggggttggaggtggtgggaggggaggaagagcacaccgggggtgtggaggtggtggtt
gaggttgggcagaggaacagcggcctgttggaggatgaggacatggagtgtgtgaccagt
ttgtag
DBGET
integrated database retrieval system
