Oncorhynchus masou masou (cherry salmon): 135547187
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Entry
135547187 CDS
T10723
Symbol
scn1laa
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135547187 (scn1laa)
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135547187 (scn1laa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
PFF1_TM
ATP-synt_B
Spem1
Motif
Other DBs
NCBI-GeneID:
135547187
NCBI-ProteinID:
XP_064832023
LinkDB
All DBs
Position
10:14415394..14467566
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AA seq
1991 aa
AA seq
DB search
MAQLLVPPGPDSFRLFCRESLDAIERRIAEENAKKPKGKPNDDGDNGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLSPFNPLRRIS
IKVLVHSLFSMVIMFTILTNCAFMTLSQPPDWAKNIEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTSFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIRPNSTNLLNDTLDFNGKEYND
GDFNETVPFNWTNYTNNPDNYYYLPGKRDALLCGNGSGAGLCPEGYWCVKAGRNPDFGYT
SFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVA
MAYDEQNQATMEEAQKKEEEFQAMLEQLRRQQEDAQAAATVMPAESGEFGKRGDLTESSS
EASKLSSKSAKERRNRRKKRKQREEEEREDNDKWHRSESESSMKKNHFRFSMDASNLHNY
DMSCSTPYQSFLSIRGSLFSSRRNSRASLYSFRDRARDIGSENDFADDENSTFEDNDSRR
GSLFVPRRSDRRSSNVSQNSMPSHVVLPANGKMHSSVDCNGVVSLVGGASLPKSPEGLLL
PEENTTETEYRKARYGSYQASMDFLEDPVARQRALSVASVITNTMEELEESRQKCPPCWY
KFANTFLIWDCCPKWLRIKKIVKMIVMDPFVDLAITICIVMNTVFMAMEHYQMSGEFNTM
LYVGNLVFTGIFTAEMCFKIIALDPYIYFQEGWNIFDGIIVSLSLMELGLANVSGMSVLR
SFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDC
VCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLMVMVIG
NLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIDRIHQGVAFVKALVRRSFQSICL
RKKKRSLNEDTTLDDLHKTMGTNWNSNHTTVEIMKDPDYIKDGNGATSGLGVGVCSNAAG
KYIMNDNTDYMPFIHNASLTVTVPIAVGESDLNTEDFSSDSSDIEESKEQLSEDHPLSSS
EGSTVDIRPPGEGEGSVGMEPEESMEPEGCFTDGCVRRFQCCQVNVDEAKWKMWWTLRKT
CFRIVEHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTVLEFADKVFTHIFILEMLLK
WVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITTQERFKVRDV
ANKTECLALEGAYWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPDYE
VNLYMYMYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPANKFQGYVFDFITKQAFDIVIMILICLNMVTMMVETDDQTDDMDGILY
KINLVFIVMFTGECILKMFSLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYFVSPTL
FRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAY
VRKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSRKEHPGSKYKG
GDCGNPPVAIIFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWE
KFDARATQFMEYEKLSDFADALDPPLRISKPNKIQLIYMDLPMVSGERIHCLDILFAFTK
RVLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSALIIQRAFRRYLLRR
IVKRASAVYKEKMLLDKEVLVIDKFNEISTSDRTDMTYSTGSPPSYDSVTKPEKNKYEKV
KREKEVKKKKK
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtacctccaggaccagacagcttccggctgttttgtcgcgagtcc
cttgatgccatcgagaggcggatcgctgaggagaacgccaagaaacccaaggggaagccc
aatgacgatggcgacaacggacccaagcccagcagtgacctggaggcaggcaaatcactg
ccactcatatatggggacattcccaaaggattggtgtccacaccactggaggacctggac
accttctacagcaaccagaaaacctttatagtattgaaccgagggaaggccatcttccgc
ttcaatgccactcctgccttgtatgtgttaagccccttcaaccctcttagaagaatatca
attaaggttttggttcactcattgttcagcatggtaatcatgttcaccatccttaccaac
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatatagagtacacattc
actggaatttatacatttgagtctcttataaaaatattggcaaggggcttctgtgtcggg
aagttcacctttctacgagatccatggaactggttggatttctgtgtcattgtcatggca
tatgtcacatcgtttgtggacctgggcaacgtgtcagcactgagaacgttcagggttctc
cgagcactgaaaacgatatcggtcatcccaggcctcaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctagtagggctgcagctgtttatgggcaatttaagaaacaaatgtttaaggatccgt
cctaactcaaccaacctcttgaatgatacattggactttaatgggaaggagtataatgat
ggggactttaacgagaccgtcccgttcaactggaccaattacactaataatcctgataat
tattactacctcccaggtaaaagggatgctttgctttgtggaaatggcagtggtgctggg
ctgtgtccagagggatactggtgcgtcaaagcgggccggaacccagacttcggctacacc
agctttgacacgttcagctgggccttcctgtctctgttcagactgatgactcaggactac
tgggagaacctctaccagcagaccctgcgggctgctgggaagccgtatatgatcttcttt
gtgctggtcatcttcctgggctccttctacctgatcaacctgatcctggctgtggttgcc
atggcgtacgacgagcagaaccaggccaccatggaggaagctcagaagaaggaggaggag
ttccaggccatgctggagcagctgagaagacagcaggaggatgcacaggcggcggcaacg
gtgatgccggctgagagtggggagttcggtaagagaggggacctcactgagtcctcctca
gaggcctccaaactcagctccaagagcgccaaagagaggcgcaacaggcgcaagaagagg
aagcagagggaggaggaggagagagaggacaatgacaagtggcacaggtctgagtccgaa
agcagtatgaaaaagaatcacttccgcttctccatggatgcctctaacctgcacaactat
gacatgagctgttcaacaccataccagtccttcctgagtatccgcggatccctgttctcg
tccagacggaacagccgggctagcctctacagcttccgggaccgtgcacgggacatcggc
tcggagaacgactttgccgacgatgagaacagcactttcgaggacaacgacagtcgccgg
ggctctctgtttgtccctcggcggagcgatcggcgctccagcaacgtgagccagaacagc
atgccatcacacgtcgtgctgccagcaaatgggaagatgcacagctccgtcgactgcaac
ggggtggtgtccctagtgggcggggcttcactccccaagtcacctgagggactccttctg
ccagaggaaaacactacggagacagagtatagaaaggcccgatatggatcgtaccaggcc
tctatggacttcctggaagacccagttgccaggcagagggcgctcagtgtagctagtgtt
ataaccaacactatggaagaacttgaagaatcgagacagaagtgccctccttgctggtac
aagtttgccaacaccttcctcatctgggactgttgtccgaagtggctgaggatcaagaaa
atagtcaagatgatcgtgatggacccgtttgtagacctagctatcaccatatgtattgtt
atgaacacagtgttcatggctatggagcattaccaaatgtctggggagttcaacaccatg
ctttatgtgggaaacctggtgttcacgggtatcttcacagctgagatgtgtttcaagatt
attgctttggatccatacatttattttcaggaaggctggaatatatttgatggtatcatt
gtcagtttgagcttgatggagcttggcttggccaacgtgtctggaatgtctgtcctcaga
tcattccgattgctgagagtattcaaactggccaagtcttggcccacactgaacaagctg
atcaagatcattggtaactcagtgggggccttgggtaatctcaccctcgtactggccatc
attgtcttcatcttcgccgtggtgggcatgcagctttttgggaagagctacagagactgt
gtgtgtaagatctctacagactgcacactgccccggtggcacatgcatgacttcttccac
tccttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatgtgggactgt
atggaggtggctggtcagagcatgtgtctcatcgtcttcctgatggtcatggtcatcggg
aacctagtggtcctgaatctgttcctggccttgctgctgagctcgttcagtgctgataac
ctggcggccacggatgatgacagcgagatgaacaatctgacggtggccatagaccgcatc
caccagggcgtcgccttcgtcaaggccttggtgcgccgctctttccaaagcatctgtctg
aggaagaagaagaggagcctgaacgaggacacgaccctggatgacctccacaaaaccatg
gggaccaactggaactccaaccacaccactgtggagatcatgaaagaccccgattacata
aaggatggcaatggcgccaccagtgggttgggagtgggggtgtgcagcaatgcagcaggg
aagtacataatgaatgacaacactgactatatgccgttcatccacaacgccagcctgacc
gtcacagtgcccatcgctgtgggagagtcggacctcaacaccgaggacttcagcagcgat
tcctcggacatagaggaaagcaaagagcagctatctgaagaccatccgctgagctcctca
gagggcagtacagtggacattaggcccccaggagagggagagggctcggtgggcatggag
cctgaggagtccatggaacctgaaggctgcttcactgatggatgtgtccgcagattccaa
tgctgccaagtgaacgttgatgaggccaagtggaagatgtggtggacgttgagaaaaact
tgtttcaggatagtggagcacaactggtttgagagctttatcatcttcatgatcctgctc
agcagtggagcgctggcatttgaggacatctacatcgagaagaggaagacgattaagacg
gtgttggagtttgcagacaaagtcttcacccacatcttcatcttggagatgttgctgaag
tgggtggcctatggattcgccaaatacttcaccaacgcttggtgctggctggacttcctc
attgtcgacgtgtctcttgtcagccttgtggccaacgccctgggctacgctgagctgagt
gccatcaagtccctgaggactctacgagcactgaggcccctgagagcgctgtcccgcttc
gagggcatgagggtggtggtcaacgctctgctcggagccatcccctccatcttcaatgtg
ctgctggtctgcctcatcttctggctcatcttcagcatcatgggcgttaacctgtttgca
gggaaatactaccattgtgtcaacatcaccacacaggagcgcttcaaagttagagacgta
gctaacaagacagaatgtttggctttggaaggtgcctactggaagaatgtcaagatcaac
tttgataacgtgggagcgggctatctggcactgttacaagtggctacattcaaaggctgg
atggacatcatgtatgcagctgtggactctcgcaatttggaagatcaacccgactatgaa
gttaatctgtacatgtatatgtactttgtggtattcatcatatttggatccttctttaca
ctcaacctcttcattggtgtcattatagacaacttcaatcagcaaaagaaaaagtttgga
ggtcaagacatcttcatgacagaggaacagaagaaatactacaatgcgatgaagaagctt
ggctcaaagaaaccccaaaagcctatcccaaggccagcgaacaagtttcaaggatatgtc
tttgatttcattacaaagcaagccttcgacattgtcatcatgattctcatatgccttaat
atggtcaccatgatggtggagacggacgaccagacggacgacatggatggaattctctat
aagatcaacctggtgtttattgtcatgtttaccggagagtgtattctgaagatgttctca
ctccgccaatactacttcaccattgggtggaatgtatttgactttattgttgttatcctg
tcgataattggtatgtttctgtctgaactgatagagaagtactttgtttcaccaacctta
ttccgagtcattcgactggcccggattggtcgcatccttcgcctcatcaagagtgccaag
ggaatccgtacactcttgtttgctttgatgatgtcacttcctgccttgttcaatattggt
ctcctgctcttcttagtgatgtttatttatgccatctttggcatgtcgaactttgcatac
gtcaggaaggagtctgggattgatgacatgttcaactttgagacatttggcaacagcatg
atctgcctgttccagatcaccacgtcagctggctgggacggcctgctggcacccatccta
aacaagagagagccagactgtgacagccgtaaagagcacccaggcagcaagtacaagggg
ggagactgtgggaatccccctgtagccattatcttctttgtgagctacatcataatctgt
ttcctcattgtggtcaacatgtacattgctgtcatcctggagaacttcagtgtggctact
gaggagagcgctgagcccctgagcgaggatgactttgagatgttctacgaggtctgggag
aagtttgatgcacgggccacccagttcatggagtatgagaagctgtctgacttcgctgat
gccttggaccccccgctacgcatttctaagcccaacaagatccagttgatctacatggat
ttgcccatggtgagtggggagcgcatccactgcctggacatcctgtttgccttcaccaag
cgcgtcctgggtgagggcgaaggcttggacatcctccgtggtcaaatggaggagcgcttt
atggcctccaacccctccaaggtgtcctacgaacccatcaccaccacgctacgccgtaaa
caggaagacatgtctgccctgataattcagagagctttcagacgatatctgctcagacgt
attgttaaacgggcctctgccgtgtacaaagagaagatgctccttgataaagaggttctc
gtcatagacaaatttaacgagatctctacttcagacagaactgacatgacatactccaca
ggctctcccccatcatacgacagtgtcacaaaaccagagaaaaacaaatatgaaaaagtc
aagagagagaaggaggtgaagaagaaaaagaagtga
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