Oncorhynchus masou masou (cherry salmon): 135547488
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Entry
135547488 CDS
T10723
Name
(RefSeq) high-affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135547488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135547488
Transporters [BR:
omm02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
135547488
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
135547488
NCBI-ProteinID:
XP_064832615
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Position
10:29978289..29988844
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AA seq
590 aa
AA seq
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MAVHAEGIVAIVIFYLLILAVGIWAAWKNKNSGVSEGQDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDIDINMSVVISALIAIFYTLV
GGLYSVAYTDVVQLFCIFLGLWVSVPFALYNPAVSSISVTAKEAVYQTPWLGKIDSADTW
MWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVLIGAIGAST
DWNQTTYGAIPPKEKDQSDMILPIVLQHLCPPWISFFGLGAVSAAVMSSADSSILSASSM
FARNIYKLAFRQSATDREIVWVMRITIFVFGALATAMALLTGTVYGLWYLSSDLVYVIIF
PQLLSVLFIKGTNTYGSVAGYVFGLLLRIGGGEPYLKLPPFIYYPGWVQQEKIHHLTGDV
EYFIQQRFPFKTVSMLASFLGNVAFSYLLKYLFESGTLSHKYDFMDAVVSKHSKEIMDKT
TLVSNDNIILSEMAPVKTHLSTSLAGAFTNTEALSDDELSSPESLNNHQE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccgtccacgctgaggggatcgtggctatagtgatcttctacttgcttattctggcc
gtggggatatgggccgcgtggaagaacaaaaactccggggtgtcggagggccaggaccgc
agtgaaaccatcatggtgggcgggagggacattgggttgttcgtcggtggattcaccatg
acggcgacatgggtgggcggcggctacatcaacgggacagcagagtatgtctacctgcct
gactacggccttgcctgggctcaggctccctttggatacgccctcagtctggtagtaggt
ggcctgttctttgccaagcccatgcgctccaggggatacgtcaccatgctggacccgttc
cagcagatatatgggaagcgcatgggggggctgctcttcattcccgcgctcatgggggag
atcttctggtctgccgccatcttgtcagccctgggagctactctgagtgtgattgtggac
attgacatcaacatgtcggtggtgatctcggccctgatagccatcttctacaccctggta
ggaggcctgtactctgtggcctacacggacgtggtgcagctcttctgtatcttcctggga
ctatgggtcagtgtgccgtttgccctgtacaacccagcggtgtcaagcatcagtgtgaca
gctaaagaggctgtgtaccagacaccctggctgggtaagatagactcagcagacacctgg
atgtggatcgacaacttctgtcttctgatgttgggggggattccatggcaggtgtatttt
caacgggttctctctgcctcttcagctacgtacgcccaggttctgtccttcatcgctgcc
gcaggctgcctggtcatggctgtcccctccgtcctcataggagcgataggggcctccaca
gactggaaccagactacatacggggcaattcctcccaaagagaaggaccaatcagatatg
atcctgcccatcgtgctgcagcacctgtgcccaccctggatctccttctttggtctgggg
gcggtgtctgccgctgtgatgtcatcagcggactcctccatcctttcagccagttcaatg
ttcgccagaaacatctacaagctggccttcagacagtctgcgacagaccgtgagatcgtg
tgggtgatgcgtatcaccatctttgtgttcggagctctggccacggccatggcgttgctc
acagggacagtatacggcctgtggtacctgagctccgacctggtctatgttatcatcttc
ccacagctgctcagcgtgctcttcatcaaaggaaccaacacgtacggctcggtggccggc
tacgtcttcggtctgctgctgcgtatcgggggaggggagccctacctcaaactacccccc
tttatctactaccccggctgggtgcaacaggagaagatccaccacctgactggagacgtg
gagtacttcatccagcagcgcttcccctttaaaacggtctccatgctggcctccttcctg
ggtaacgtggccttctcctacctgctcaagtacctgtttgagtctgggactctgtctcat
aagtatgacttcatggatgctgtggtatccaaacacagtaaggagatcatggacaagacc
acgttggtcagtaacgacaacatcatcttgtcggagatggcgccggtcaaaacgcacctc
agcacctcactggccggggcgtttacaaacacagaggctctcagtgacgatgagttgtcc
agccccgagtccttaaacaaccaccaggagtag
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