Oncorhynchus masou masou (cherry salmon): 135550471
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Entry
135550471 CDS
T10723
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135550471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135550471
03012 Translation factors [BR:
omm03012
]
135550471
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135550471
Translation factors [BR:
omm03012
]
Eukaryotic type
Release factors
135550471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
135550471
NCBI-ProteinID:
XP_064837386
LinkDB
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Position
12:complement(55912123..55917062)
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AA seq
446 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVTLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRCHGAEGLAMVEKGTDEKTLYLTPEQE
KDKSHFTDKETGQEHELIESMPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcggcagacaggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggtacgagtatgatctccttgattatccct
ccaaaggatcagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aatattaaaagcagagtcaacaggctctctgtgctcggagccatcacctctgtacagcag
agacttaaactctacaataaagtgcctcccaacggcttggttgtatactgtggcaccatt
gtgacggacgagggcaaagagaaaaaagtcaatattgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagccttgctg
tcagatgacagcaagtttggttttattgtgattgatggaagtggcgccctcttcggaacc
ctgcagggaaacaccagggaagtgctacacaagttcactgtggacctacccaagaagcac
ggcagaggagggcagtctgccttgcgttttgctcgtttgaggatggagaagagacacaac
tatgtccgaaaggtggcggagacggcagtcacgctttttgtttccaatgacaaggtcaac
gtagcaggcatggtcttggcaggttcagctgacttcaagacggagctcagccagtccgat
atgtttgacccgaggctacaagcaaagatcctgaagctggttgacatatcatatggtggg
gagaatgggttcaaccaggccattgagctgtccgcagaagtgctttccaatgttaaattc
attcaggagaagaaacttataggacgatactttgatgagatcagccaggatacagggaag
tactgctttggggtggaagacacactgaaagccctggaaatgggtgctgttgagattctg
attgtctacgagaacctggataccatgagatacatcctgagatgccacggagcagaggga
cttgctatggtggagaagggtacagatgagaaaacattgtatttgacaccagagcaggag
aaagacaagtctcacttcacagacaaagagactgggcaggagcatgagctgatcgagagc
atgccgttacttgaatggtttgccaacagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtcaagggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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