Oncorhynchus masou masou (cherry salmon): 135553395
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Entry
135553395 CDS
T10723
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135553395
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135553395
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
Egg_lysin
BAR_4
Motif
Other DBs
NCBI-GeneID:
135553395
NCBI-ProteinID:
XP_064841606
LinkDB
All DBs
Position
13:complement(64784725..64809807)
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AA seq
1110 aa
AA seq
DB search
MEEEGDYASVKQALEVGMKGREERRREEGDYASVKQALEVGMKGREERRREEGREGMEEE
GDYASVKQALEVGMKGREERRREEGDYASVKQALEVGMKGREERRREEGDYASVKQALEV
GMKGREERRGEEGREGMEEEGDYASVKQALEVVRQGREERRREEGDYASVKQALEVGMKG
REERRREEGDYASVKQALEVGMKEREERRREEGDYASVKQALEEAEIYFRININCIDPLG
RTALLIAIENENLEIIELLLSYNVYIGDALLHAIRKEVVGAVEMLLNHKKPSGEKQVPPI
LLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCMECVSSSDVDSL
RHSRSRLNIYKALASPSLLALSSEDPFLTAFQLSWELQELSKVENEFMSEYEELSQQCKQ
FAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEFVAQPNCQQLL
ASRWYDEFPGWRRRHWAVKFLTCVFIGLLFPLLSFCYLVSPKSRYGHFIRQPFIKFICHT
TSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGFIWAEIKQMWDGGFQDYI
HDWWNLMDFVMNSLYLATISLKFVAYVKYSGFRARNEWQMWHPTLVAEAVFAIANIFSSI
RLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETDEGLKGC
KGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQFTEFVGATMFGTYNVISL
VVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNIIPSPKSIWYF
ICWIKKHIFKITRAKKTETFGSIGRRAALNVRTNHQYQEVLRNLVKRYVAAMIRDAKTEE
GLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGVALAESKPSEDAGASILVYPDHSFK
YSPKFSPATPKTNMFPDTTSILQQRAALSSTSSTSPSTSQGLNRLVNGSVVPSWASTDTS
SSPTSSTPISSSSSTPISSSSSTPIHASTKDRLARKDFPKVICDFGLYSVSEEMGEVDLE
ELDCDGEKEEQGGARERTCTEKEDNEGRGE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaaggagactatgcctcagtcaaacaggctctagaggtagggatgaaggga
cgagaggaaaggaggagggaggaaggagactacgcctcagtcaaacaggctctagaggta
gggatgaagggacgagaggaaaggaggagggaggaaggaagggaggggatggaggaggaa
ggagactatgcctcagtcaaacaggctctagaggtagggatgaagggacgagaggaaagg
aggagggaggaaggagactacgcctcagtcaaacaggctctagaggtagggatgaaggga
cgagaggaaaggaggagggaggaaggagactacgcctcagtcaaacaggctctagaggta
gggatgaagggacgagaggaaaggaggggggaggaaggaagggaggggatggaggaggaa
ggagactatgcctcagtcaaacaggctctagaggtagtgaggcagggacgagaggaaagg
aggagggaggaaggagactacgcctcagtcaaacaggctctagaggtagggatgaaggga
cgagaggaaaggaggagggaggaaggagactacgcctcagtcaaacaggctctagaggta
gggatgaaggaacgagaggaaaggaggagggaggaaggagactatgcctcagtcaaacag
gctctagaggaggcagagatctacttccggatcaacattaactgtatagacccgttgggc
cgcacagctctgctgatcgctattgagaatgagaacctcgagattatagaactgctgctc
agctataacgtgtacatcggtgatgctctcctacacgccatccgtaaagaggtggtgggg
gccgtggaaatgctgctcaaccacaagaagcccagcggggagaaacaggttcctcccatc
ctattggacaagcagttctctaactttactcctgacatcacacccatcatcctggcagct
cacaccaacaactatgagatcatcaaactgctggtgcagaagggggtgtccatgccccag
ccacatgaggtgcgctgtaactgcatggagtgcgtgtccagctctgatgtggatagtctg
cgtcactcccgctcacgtctcaacatctacaaggccctggccagcccatcactcctggcc
ctctccagtgaagaccctttcctcacagccttccagctttcctgggaactccaggaactc
agcaaggtggagaatgagtttatgtcggagtatgaagagttatctcagcagtgtaaacag
tttgccaaggacctgttggaccaaaccagaagttctagagaactagagctgatcctgaac
tacagagatgacatcaaccctctactggatgagaacaccaacgatctggccagactcaaa
ctggctatcaaatacacacagaaagagtttgtagcccagcctaactgtcagcagctgctt
gcatctcgttggtacgatgagttccctgggtggaggcgtcgtcactgggcagtgaagttc
ctaacctgtgtcttcatcggcctcctcttccccctcttatccttctgctacctggtctct
cctaagagccgctatggacacttcatcaggcaacccttcatcaagtttatctgccacaca
acgtcgtatcttaccttcctgttcctcctgctgctggcctcccagcacatcgtctctaca
gaccctaacagacaggggccgcctcctactgtggtggaatggatgatactaccctgggta
ctgggcttcatctgggcagagattaaacagatgtgggatggagggttccaggactacatc
catgactggtggaacctcatggactttgttatgaactctctgtacctggctaccatctct
ttgaagttcgttgcctatgtcaagtacagtggcttcagggccagaaatgaatggcagatg
tggcatcctaccctggtagcagaggctgtgtttgccatcgctaacatcttcagctccatc
cgcctcatctctctgtttacagctaactcacacctgggacctctacagatctctctgggc
aggatgctgctggacatccttaagttcctgtttatctactgcctggtgctcctggccttc
gctaacgggctcaaccagctctacttctactacgagacagacgagggactgaagggatgc
aagggcatccgctgcgcaacacagaacaacgctttctcaacgttgtttgagacgctccag
tcgttgttctggtctatctttgggttgatcagtctgtatgtgaccaacgtggaggcagac
caccagttcacagagtttgtaggggccaccatgtttggaacctataatgtcatctctctg
gtggttctactcaacatgctgatcgccatgatgaacaactcctaccaacacatcgctgat
catgcagacattgagtggaagtttgcaagaaccaagttgtggatgagttactttgaagag
ggggggactctgccttctccattcaacatcatccctagccccaagtcaatctggtacttc
atctgctggatcaagaaacacatcttcaagatcaccagggccaagaaaacagaaacattt
ggatccatagggagacgggctgccttaaacgtaagaacaaaccaccagtatcaggaggtt
ttgaggaacctggtgaagagatatgtagcagccatgatcagagatgccaagacagaggaa
ggactgactgaggagaactttaaggagctgaagcaggacatctccagctttaggtatgag
gtcctggggatgatgaaggggaaggtggggcccgggggtgggggcgtggctctagcagaa
agtaaacccagtgaagatgcaggggcctccattctggtctaccctgaccactccttcaag
tactcccccaagttttccccagccacgccgaagaccaacatgtttcccgacaccacatcc
atactccagcagagggcagccctctcctccacctcctccacatccccttccacctctcag
ggcttgaaccgactggtcaacggctctgtggtaccctcttgggcctccactgacacctcc
tccagccccacctcctccactcccatctcctcttcctcctccactcccatctcctcttcc
tcctccactcccatccatgcctccaccaaagacaggctggccaggaaagactttcccaaa
gttatctgtgactttgggctctactctgtgtctgaggagatgggagaagttgacctggag
gagctggactgtgatggagagaaggaggagcagggtggagcgagggagaggacgtgtaca
gagaaggaagacaatgaagggaggggagagtga
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integrated database retrieval system
