KEGG   Orbus mooreae: RHO11_11650
Entry
RHO11_11650       CDS       T10515                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
omo  Orbus mooreae
Pathway
omo02024  Quorum sensing
omo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:omo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RHO11_11650 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHO11_11650 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omo03019]
    RHO11_11650 (hfq)
   03036 Chromosome and associated proteins [BR:omo03036]
    RHO11_11650 (hfq)
Messenger RNA biogenesis [BR:omo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RHO11_11650 (hfq)
Chromosome and associated proteins [BR:omo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    RHO11_11650 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WVD61125
LinkDB
Position
2476969..2477220
AA seq 83 aa
MSKGQSLQDPYLNILRREHIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAISGSFSQSDEESESSN
NT seq 252 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcaatcattacaagatccttatttaaatatattacgccgtgagcatatt
ccggtatcaatttatttagttaatggaattaaattacaaggtcagattgaatctttcgat
cagtttgttattttgttgaaaaatacagtaagccaaatggtgtataagcatgccatttca
actgttgttccagctagagctatttctggttcattttcacagtctgatgaagaaagtgaa
agttcaaactaa

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