Oncorhynchus mykiss (rainbow trout): 100135847
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Entry
100135847 CDS
T07259
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
omy
Oncorhynchus mykiss (rainbow trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
100135847
NCBI-ProteinID:
XP_036809035
Ensembl:
ENSOMYG00000040426
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Position
18:complement(52514685..52551627)
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AA seq
1163 aa
AA seq
DB search
MSSVCVLKGKAVLWQDSFSPHLRTSTPSMPVVLSSGGHAPPAGQTPHAPSPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPIGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWESDEAGKDGPKGIFLDQWRDSAWGATDHSVSQPIMVSRRPGGGFHSGGEVGGS
VMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGPRDGEVEDEKREKPKAAFEVEK
LEMTEGENDVISDVINPNGLPVQNGLDVDVKEYSRQGQMQPAGTDTDMMGGVGGCVGGEG
MVPMGGGGGPKPQEDFSGVEQGVTMDTMESVMEPLQFDYNSQMAMDSQPTVGLFDYSNQQ
QLFQRPSALALQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISTGPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAQGQNQQNQQQVMRGGGN
QRPLTPSQGPQGQQNDQLISAAAVNSALAFGQGLAAGVPGYPMLAPAAYYDQTGALVVNT
GSRSGPVRLMAPAGSVIISPSAAQAVAAAAAAGGGANGGMGGGANGPFRGMQSQQPQQQG
GGAMSGNSFYGSSSLSNSSQSSSLFSQGSQTTYCSAQPGPGSASLGFGQSNSSLGATLGA
TLGGFGTAVANSSGGSGSRRDSLTGSSDLYKRTQSSLTPIGHGGFYNGTLGFSSSPGPVG
MPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSASSGSSLF
SPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRF
IQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHV
LSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQP
HALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGN
YVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVLIDEVCS
LTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK
LEKYYMKNGVDLGPLCGPPNGIM
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagggtaaagcagtgctctggcaggactcattcagcccc
cacctcagaacttcaactcccagcatgcccgtggtgctgagcagcggaggacacgccccc
cctgccggacaaaccccacatgccccatcccctagccaacagggcgtggcgggtgccggt
cggtctcaggatgatgccatggtggattacttcttccagcggcagcacggagagcagcct
ggcaaacaccgctggcccattggggataacatccacgacagccaggtgcggtcgatggat
gagctgaaccatgacttccaggccctggctctagaggggcgtgccatgggagagcagctt
ctgacaggtaagaagttttgggagagtgatgaagcggggaaagacggaccaaaaggcatc
tttctggaccagtggagggacagcgcgtggggggccacagaccactcggtatctcagcca
atcatggtgtcccgtcggcctggcggtgggttccatagcggcggggaagtgggcgggtca
gtgatgtcaccgcggtcagagagtgggggtttaggagtcagtatggtagagtacgtcctc
tcctcctctcccgctgaaaaactggactcctgcctacgcaagggaccctacggcccgagg
gatggagaggtggaggatgagaagagggagaaacctaaggctgcgtttgaagtagagaaa
ctcgagatgacggagggagagaatgatgtcatcagtgatgtcatcaaccctaatgggctc
cctgtgcagaatggcctggacgtggacgtcaaagagtacagtcgtcaaggccagatgcag
cctgcggggacagacactgacatgatggggggtgtagggggatgtgtaggaggggagggt
atggtccccatgggaggaggcgggggtcccaaaccccaagaggacttctctggtgtggaa
cagggcgtaaccatggataccatggagtctgtgatggagcctctgcagtttgactacaac
tcccagatggccatggactcacagcccaccgtggggctgtttgactacagcaaccaacaa
cagttgtttcagagacccagtgctctagcactgcagcagctgacagcagcccaacaacaa
cagtacgccttggcagcagcacagcaatctcacattggtctggctcctgcgtttgttccc
aacccttacatcatcagtacgggtccacctggaactgacccctacgctgctggactggca
gctgctgcaacactaggcccagcggtgatgcctcctcagtactacggggtgactccatgg
ggagtgtatccagctaatctgttccagcaacaggctgcagctgccaacaactcagccaat
caacaggctcaaggacagaaccagcagaaccaacaacaggtaatgcgtgggggcggtaac
cagagacccctgacccctagccaaggtccacagggtcagcagaatgaccagctgatctcc
gccgcagctgtcaactcggcgctcgccttcggacaggggctggcggccggcgtgcctggc
tatcccatgctggctccagctgcctactatgaccagacgggggcgctagtggtcaacaca
ggatctaggagtggacctgtacgcctcatggcccccgctggctcagttattatctctcca
tccgctgcacaagcagttgcggctgcagcagctgcgggtggcggggctaacggcggtatg
ggaggcggggccaatggtccgttccgaggcatgcaatcccagcagcctcagcagcagggg
ggaggggctatgtcaggaaactccttttatggatcctcctctctcagcaactcctcccag
agctcctccctcttctctcaaggtagccaaacaacgtactgctccgcccagccaggccct
ggctctgcctctctggggttcggtcagagcaactcttcactgggagcaacattgggagct
acgctgggaggctttgggaccgcagtggctaactccagtggtggaagtggttctcgtcgt
gactctctgaccggcagtagtgacttgtacaaacgcacacagtcgagtctcactcccatt
ggtcacggggggttctacaacggaacccttggctttagctcctcccccgggcctgtcgga
atgcccctgcccaaccaaggcccctcccactccctaaccccacccccatctctgtccaat
cacagctcctcatccaacctcaacctgggaggtttgaccaatggcagcggtcgtttcatt
tctgctgctccgggggcggaggccaagtatcgcagtgccagttctggctcctccctcttc
tctcccagcagccagctcttcccatcgtcacggctacgttacggaatgtcggatgtgatg
ccgtcagggcggagccggctcctggaagacttccggaacaaccgctaccccaacttgcag
ctgagagagattgctgggcacatcatggagttcagtcaggaccagcatggcagcaggttt
atccagttgaagttggagagggccagctcagcagagcgtcagctagtctttagtgagatc
ctccaggctgcctatcaactcatggtcgacgtcttcggaaactacgtcatccagaagttc
tttgagtttggcagtctggaccaaaagctggctctagcagagaggatcaggggtcatgtc
ctgtctctggccctgcagatgtatggctgtagagtcatccagaaggccctggagttcatc
ccctcagaccaacaagttataagtgagatggtgcgggagctggacggccatgtattgaag
tgtgtgaaggatcagaacggcaaccacgtggtgcagaagtgtattgagtgtgttcagccc
cacgcactacacttcataatagatgccttcaagggacaggtgtttgccctctccacccac
ccctacggctgtagagtgatccagcgtattctagaacactgccttccagaccagaccctg
cccattctggaggagctgcaccaacacactgaacaactggtgcaggaccagtatggtaac
tatgtgatccagcatgtattagaacacggcagagcggaggacaagagtaagatagtagct
gagatcagaggaaacgtactggggctcagccaacacaagtttgccagtaatgtggtggag
aagtgtgtgagccatgcgtcgcgtgcagagcgggccgtgttgatagacgaggtgtgtagc
ctgacggaggggccccacagcgccttgtacaccatgatgaaggaccagtacgccaactat
gtggttcagaagatgattgacgtggctgaaccaacacagaggaagatcgtaatgcacaag
atccggccccacatctccactctgaggaagtatacgtatggcaaacacatcctggctaag
ctggagaaatactacatgaagaatggagtggacctgggccctctctgtggccctcccaat
ggcatcatgtaa
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integrated database retrieval system