KEGG   Oncorhynchus mykiss (rainbow trout): 100135847
Entry
100135847         CDS       T07259                                 
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
omy  Oncorhynchus mykiss (rainbow trout)
SSDB
Motif
Pfam: PUF PUF_NOP9 CFAP61_N
Other DBs
NCBI-GeneID: 100135847
NCBI-ProteinID: XP_036809035
Ensembl: ENSOMYG00000040426
LinkDB
Position
18:complement(52514685..52551627)
AA seq 1163 aa
MSSVCVLKGKAVLWQDSFSPHLRTSTPSMPVVLSSGGHAPPAGQTPHAPSPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPIGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWESDEAGKDGPKGIFLDQWRDSAWGATDHSVSQPIMVSRRPGGGFHSGGEVGGS
VMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGPRDGEVEDEKREKPKAAFEVEK
LEMTEGENDVISDVINPNGLPVQNGLDVDVKEYSRQGQMQPAGTDTDMMGGVGGCVGGEG
MVPMGGGGGPKPQEDFSGVEQGVTMDTMESVMEPLQFDYNSQMAMDSQPTVGLFDYSNQQ
QLFQRPSALALQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISTGPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAQGQNQQNQQQVMRGGGN
QRPLTPSQGPQGQQNDQLISAAAVNSALAFGQGLAAGVPGYPMLAPAAYYDQTGALVVNT
GSRSGPVRLMAPAGSVIISPSAAQAVAAAAAAGGGANGGMGGGANGPFRGMQSQQPQQQG
GGAMSGNSFYGSSSLSNSSQSSSLFSQGSQTTYCSAQPGPGSASLGFGQSNSSLGATLGA
TLGGFGTAVANSSGGSGSRRDSLTGSSDLYKRTQSSLTPIGHGGFYNGTLGFSSSPGPVG
MPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSASSGSSLF
SPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRF
IQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHV
LSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQP
HALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGN
YVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVLIDEVCS
LTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK
LEKYYMKNGVDLGPLCGPPNGIM
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgagcagtgtgtgtgtgttgaagggtaaagcagtgctctggcaggactcattcagcccc
cacctcagaacttcaactcccagcatgcccgtggtgctgagcagcggaggacacgccccc
cctgccggacaaaccccacatgccccatcccctagccaacagggcgtggcgggtgccggt
cggtctcaggatgatgccatggtggattacttcttccagcggcagcacggagagcagcct
ggcaaacaccgctggcccattggggataacatccacgacagccaggtgcggtcgatggat
gagctgaaccatgacttccaggccctggctctagaggggcgtgccatgggagagcagctt
ctgacaggtaagaagttttgggagagtgatgaagcggggaaagacggaccaaaaggcatc
tttctggaccagtggagggacagcgcgtggggggccacagaccactcggtatctcagcca
atcatggtgtcccgtcggcctggcggtgggttccatagcggcggggaagtgggcgggtca
gtgatgtcaccgcggtcagagagtgggggtttaggagtcagtatggtagagtacgtcctc
tcctcctctcccgctgaaaaactggactcctgcctacgcaagggaccctacggcccgagg
gatggagaggtggaggatgagaagagggagaaacctaaggctgcgtttgaagtagagaaa
ctcgagatgacggagggagagaatgatgtcatcagtgatgtcatcaaccctaatgggctc
cctgtgcagaatggcctggacgtggacgtcaaagagtacagtcgtcaaggccagatgcag
cctgcggggacagacactgacatgatggggggtgtagggggatgtgtaggaggggagggt
atggtccccatgggaggaggcgggggtcccaaaccccaagaggacttctctggtgtggaa
cagggcgtaaccatggataccatggagtctgtgatggagcctctgcagtttgactacaac
tcccagatggccatggactcacagcccaccgtggggctgtttgactacagcaaccaacaa
cagttgtttcagagacccagtgctctagcactgcagcagctgacagcagcccaacaacaa
cagtacgccttggcagcagcacagcaatctcacattggtctggctcctgcgtttgttccc
aacccttacatcatcagtacgggtccacctggaactgacccctacgctgctggactggca
gctgctgcaacactaggcccagcggtgatgcctcctcagtactacggggtgactccatgg
ggagtgtatccagctaatctgttccagcaacaggctgcagctgccaacaactcagccaat
caacaggctcaaggacagaaccagcagaaccaacaacaggtaatgcgtgggggcggtaac
cagagacccctgacccctagccaaggtccacagggtcagcagaatgaccagctgatctcc
gccgcagctgtcaactcggcgctcgccttcggacaggggctggcggccggcgtgcctggc
tatcccatgctggctccagctgcctactatgaccagacgggggcgctagtggtcaacaca
ggatctaggagtggacctgtacgcctcatggcccccgctggctcagttattatctctcca
tccgctgcacaagcagttgcggctgcagcagctgcgggtggcggggctaacggcggtatg
ggaggcggggccaatggtccgttccgaggcatgcaatcccagcagcctcagcagcagggg
ggaggggctatgtcaggaaactccttttatggatcctcctctctcagcaactcctcccag
agctcctccctcttctctcaaggtagccaaacaacgtactgctccgcccagccaggccct
ggctctgcctctctggggttcggtcagagcaactcttcactgggagcaacattgggagct
acgctgggaggctttgggaccgcagtggctaactccagtggtggaagtggttctcgtcgt
gactctctgaccggcagtagtgacttgtacaaacgcacacagtcgagtctcactcccatt
ggtcacggggggttctacaacggaacccttggctttagctcctcccccgggcctgtcgga
atgcccctgcccaaccaaggcccctcccactccctaaccccacccccatctctgtccaat
cacagctcctcatccaacctcaacctgggaggtttgaccaatggcagcggtcgtttcatt
tctgctgctccgggggcggaggccaagtatcgcagtgccagttctggctcctccctcttc
tctcccagcagccagctcttcccatcgtcacggctacgttacggaatgtcggatgtgatg
ccgtcagggcggagccggctcctggaagacttccggaacaaccgctaccccaacttgcag
ctgagagagattgctgggcacatcatggagttcagtcaggaccagcatggcagcaggttt
atccagttgaagttggagagggccagctcagcagagcgtcagctagtctttagtgagatc
ctccaggctgcctatcaactcatggtcgacgtcttcggaaactacgtcatccagaagttc
tttgagtttggcagtctggaccaaaagctggctctagcagagaggatcaggggtcatgtc
ctgtctctggccctgcagatgtatggctgtagagtcatccagaaggccctggagttcatc
ccctcagaccaacaagttataagtgagatggtgcgggagctggacggccatgtattgaag
tgtgtgaaggatcagaacggcaaccacgtggtgcagaagtgtattgagtgtgttcagccc
cacgcactacacttcataatagatgccttcaagggacaggtgtttgccctctccacccac
ccctacggctgtagagtgatccagcgtattctagaacactgccttccagaccagaccctg
cccattctggaggagctgcaccaacacactgaacaactggtgcaggaccagtatggtaac
tatgtgatccagcatgtattagaacacggcagagcggaggacaagagtaagatagtagct
gagatcagaggaaacgtactggggctcagccaacacaagtttgccagtaatgtggtggag
aagtgtgtgagccatgcgtcgcgtgcagagcgggccgtgttgatagacgaggtgtgtagc
ctgacggaggggccccacagcgccttgtacaccatgatgaaggaccagtacgccaactat
gtggttcagaagatgattgacgtggctgaaccaacacagaggaagatcgtaatgcacaag
atccggccccacatctccactctgaggaagtatacgtatggcaaacacatcctggctaag
ctggagaaatactacatgaagaatggagtggacctgggccctctctgtggccctcccaat
ggcatcatgtaa

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