KEGG   Oncorhynchus mykiss (rainbow trout): 100136223
Entry
100136223         CDS       T07259                                 
Symbol
capn1
Name
(RefSeq) calpain 1, (mu/I) large subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141  Protein processing in endoplasmic reticulum
omy04210  Apoptosis
omy04217  Necroptosis
omy04218  Cellular senescence
omy04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100136223 (capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100136223 (capn1)
   04217 Necroptosis
    100136223 (capn1)
   04218 Cellular senescence
    100136223 (capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100136223 (capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:omy01002]
    100136223 (capn1)
Enzymes [BR:omy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     100136223 (capn1)
Peptidases and inhibitors [BR:omy01002]
 Cysteine peptidases
  Family C2: calpain family
   100136223 (capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_5 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 100136223
NCBI-ProteinID: NP_001117962
Ensembl: ENSOMYG00000018375
UniProt: Q672H2
LinkDB
Position
21:complement(41059304..41100666)
AA seq 704 aa
MEQVYASGMAAKLRSQWDRDEGLGQNHNAVKFQGQDFKSLRARCLQSRSLFEDSLFPCAS
SSLGFNELGPRSSKTQGVRWMRPTEICTRPQFIVDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQDFRGQYAGIFHFQFWQYGEWVEVVIDDRLPVKDGKLLFVHSAEGGE
FWSALLEKAYAKLHGCYEALSGGSTSEGFEDFTGGVTEMYELRKAPSDLYSIISRAVERG
SLLGCSIDITGSQDMEAVTFKKLVKGHAYSVTGVDEVVYRGNMTKLVRIRNPWGEIEWTG
AWSDNSREWESVDRSVRGRLQNRSEDGEFWMSFSDFLREFTRLEICNLTADALEANQQKK
WSSAVYQGEWRRGSTAGGCRNFPATFWINPQFKIDLQHPDTAGQSDCSFLVALMQKDRRK
KRKEGKDMETIGFAIYEVPNEYVGRSGIHLKRDFFLTHGSSARSELFINLREVSSRFQLP
AGEYIIVPSTFEPQKEGDFVLRVFSEKPANSEELDDDVTAELPAESQLDESQIDAGFKSL
FRQLAGEDMEISATELQTILNRIISKHKDLKTDGFGPEACRTMINLMDTDGSGKLGLAEF
HVLWEKIKRYLTVFRQFDLDKSGTMSSYEMRMALEAAGFKLKNHLFQLIILRYTEADLTV
DFDNFVTCLVRLETMFKTFKTMDADSDGVIELNFFQWITLTMFA
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagcaggtgtatgcgtcggggatggccgccaagttgcgcagccagtgggaccgggac
gagggtctgggccagaaccacaacgcagtcaagttccagggccaggactttaagtcgctg
agggcccggtgcctccagagccgcagcctgtttgaggacagcctgttcccgtgcgcctcc
tcttctctggggttcaatgagttgggaccacgctcctccaagacccaaggagtacgctgg
atgagacctacggagatctgtacccgtccccagttcatagtggatggagccactcgcact
gatatctgccagggagctttaggtgactgctggttgctggcagccatagcctcgttgact
ctgaacgacaacctcctccacagagtggtgcctcatggacaggacttcagaggccagtac
gctggcatcttccacttccagttctggcagtatggggagtgggtggaggtggtgatcgat
gacaggctgccggtgaaggatgggaagctactctttgtccactctgccgagggaggagaa
ttctggagcgccctgctggagaaagcctacgccaagctgcatggctgttacgaggccctg
tcaggaggcagcacgtcagagggttttgaggacttcacaggaggggtaacggagatgtat
gagctgaggaaagcgccctctgacctctacagtatcatcagccgggccgtggagagagga
tcgctgctgggctgctccatagacatcaccggcagtcaggacatggaggctgtgaccttt
aagaagctggtgaaaggtcacgcctactcagtgaccggggtcgacgaggtggtgtacaga
gggaatatgaccaaactggtccgcatccgcaacccatggggagagatagagtggactggt
gcctggagtgacaactccagagagtgggagagcgtagaccggtcagtcagagggcgactc
cagaaccgcagtgaggacggagagttctggatgtcattcagcgacttcctgcgtgagttt
acgcgtctggagatctgtaacctcacagcagacgccctggaggccaaccagcagaagaag
tggagctcagccgtctaccagggggagtggaggaggggcagcacggccgggggctgcagg
aacttccctgccacattctggatcaacccacaattcaagatcgacttgcagcaccccgac
acagccggccaatcagattgcagcttcctggtggcgctgatgcagaaggaccggagaaag
aaacgcaaggagggcaaggacatggagaccatcggatttgccatttacgaggttcctaat
gagtacgtgggtagatcaggcatccacctaaagagagatttcttcctgacgcacggttcc
agcgcccgctctgagctcttcatcaacctgagagaggtgagctctcgcttccagctgccc
gccggggagtacatcatcgtcccttccaccttcgaaccccagaaggagggagactttgtc
ctcagggttttctctgagaaaccagctaactcagaggagctggatgatgacgtcacagct
gaacttcctgcagagtctcagctggacgagagccagattgacgctggcttcaagagtctg
ttcagacagctggctggggaggacatggagatcagtgccacagagctgcagaccatactc
aacaggatcatcagcaagcacaaagatctgaagacagatggatttggaccggaagcttgt
cgcactatgatcaacctgatggacactgatggtagtggtaaactgggactggcagagttc
cacgtgctgtgggagaagattaaacgatacctgactgtattccgtcagtttgacctggac
aagtcaggcaccatgagttcctatgagatgaggatggctctggaggcagcaggcttcaag
ctgaagaaccacctgttccagctgatcattctgcgctacactgaggccgacctgacagtt
gactttgacaactttgttacctgcctggttaggctggagaccatgttcaaaaccttcaag
acgatggacgcagattctgatggagtcatagaactcaacttcttccagtggatcaccctg
accatgtttgcctaa

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