Oncorhynchus mykiss (rainbow trout): 110486869
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Entry
110486869 CDS
T07259
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110486869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110486869
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Others
GGA
110486869
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
VCIP135_N
TraC-like
DUF6675
Motif
Other DBs
NCBI-GeneID:
110486869
NCBI-ProteinID:
XP_036794867
UniProt:
A0A8C7SQD3
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All DBs
Position
12:complement(86898624..86909764)
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AA seq
726 aa
AA seq
DB search
MSLRDVSNAMAYQEGETLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQISVRLLV
HKIQSPQEWEALQALTVLEACMKNCGRRFHNEIGKYRFLNELIKVVSPKYMGDRVPEKVK
TKIIEMLYSWTVAFPNEAKINEAYQTLRRQGLVTMDPELPVDKTLIPSPPTRPKNPVFDN
EDMGKLLAELLRSKNPEDLQEANRLIKNMVKEDDVRVQKVTKRIHTLEEVGINVKLLSEM
LSHYDKDRSSQSDREIIKELYDRCDKLRRAAFKMATETEDNDTSLGDILQASDDLSRVIN
SYKKIVKGQTVNGDIEDPRSAAGEETTGNSDNTETLIDLAGIDVPNSTSPPPAPLPLVSD
PTSANHLGFPIPVLPPPPKRLAGLHASQNSSPSHPATDKALNALSLLDDELLSLGLNDPV
PSLNSQSKPTLNEIANPWTSLQAPDPGLDLFGTIAGPGPVFPPVQPAPAPATAPATHSLQ
DLQDLAMLDFGEPKSLRVGGGFGMAASMGAVVPPSLGAMVPQVPLSSTSLLPGPMPGSPA
LSHTKAQTLSSAPGSPLFSSLSPFHHSSFQGGSPARGLGPEASLGNVHVPLEAIRPSKGL
PVTAYDKDGVRVLLNFASDCPPCRPDVLVLVVSMLNTAPLPVQNVVLQAAVPKSMKVKLQ
PPSGTELPPFNPTLPPASITQVMLLANPLKEKVRLRYKLAFTLGNRQCSEVGEVDQFPPP
DRWGHL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacgcgatgtttccaatgctatggcgtaccaggaaggggagacgctagaatcc
tggctcaataaagccacccatccaacaaacagacaggaggattgggagtacatcatcggt
ttctgtgaccagatcaataaggaattggaaggtccccagatatctgtcaggttgttggtt
cacaaaatccaatcgccgcaagaatgggaggcgcttcaggctttaacagtattagaagca
tgtatgaagaactgcgggagaaggtttcataatgaaatcgggaaatatcggtttctgaac
gagctgatcaaagttgtttctcctaagtacatgggagacagagtaccagagaaggtaaag
acaaagattattgagatgctgtacagctggacagtggctttccccaacgaggccaaaatc
aacgaagcataccagacactaaggagacagggccttgtaactatggaccctgagctccca
gtggacaagactctgattccttcaccccccacacgtcccaagaaccctgtgtttgacaat
gaggacatgggcaagctactagcagagcttctgaggagcaaaaacccagaggacctgcag
gaagccaacaggctcatcaagaacatggtgaaggaggacgatgtcagggttcagaaagtg
accaaacgcatccacaccctggaagaggtgggcatcaacgtcaagctgctgagtgagatg
ctgtcccactacgacaaggacaggtcctcccagtcagacagagagatcatcaaggaacta
tacgaccgctgtgacaagttgagacgcgctgctttcaaaatggccacagagactgaagat
aacgacacaagtttaggtgacatcctgcaggccagcgatgacctctcacgggtcatcaac
tcctacaagaagattgtcaagggacagaccgtgaatggagacatcgaggatcctagatct
gcagctggtgaagagaccacagggaacagtgacaacacagagaccttgattgacctggct
ggtattgacgttccaaactccacctctcctccgcctgcccctctcccattggtctccgat
cccacttcagccaatcacctggggttcccaatccctgtcttgcctcctcctccaaaaagg
ttggccgggttgcatgccagtcagaacagcagccccagccacccagccaccgacaaggcc
ctcaacgctctctctctccttgacgatgagctgctatccttaggcctgaacgatccagtt
ccttctctgaacagccaatcaaaaccaacgctgaatgaaatagcaaatccgtggacctcc
ttacaggctcctgaccctggcctggacttgtttggcactatagcagggccaggcccagta
tttcccccagtccagccagcgccagcccccgccacggcccctgccacccacagcctccag
gacctccaagacctggccatgctggactttggagagccaaagagtttgcgtgttggcggc
ggattcgggatggcagcctctatgggggccgtagtaccaccctccttgggggccatggta
ccccaggtccccctctcctcgacctccctcctccctggccccatgcctggctcccctgcg
ttgtcccacaccaaagcccagacgctgagctctgccccaggcagccccctgttcagctcc
ctctcccccttccaccactcctccttccaggggggcagcccagccagggggctaggaccg
gaggcctccctgggcaacgtgcacgtccccctggaggccatcagacccagtaaagggctc
cctgtaacggcctatgataaggatggggtgcgtgtgctgttgaactttgcctcagactgt
cccccttgcagaccagacgtgctggtgttagtggtgtccatgctgaacactgcaccactg
cccgttcagaacgtggtccttcaggccgccgtgcccaagtccatgaaggtgaagctgcag
cctccgtcaggaacagagctgcctccctttaaccccacccttcccccggcctccatcaca
caggtcatgctgctggccaatcccctgaaggagaaggtgcgtctgcgctacaagctggcg
ttcactctcggaaacaggcagtgctcagaggtgggcgaggtggaccagttccccccgcca
gacagatggggtcacctatag
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