Oncorhynchus mykiss (rainbow trout): 110488745
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Entry
110488745 CDS
T07259
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04514
Cell adhesion molecule (CAM) interaction
omy04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110488745
04514 Cell adhesion molecule (CAM) interaction
110488745
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110488745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110488745
04090 CD molecules [BR:
omy04090
]
110488745
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Tumor necrosis fators
110488745
CD molecules [BR:
omy04090
]
Proteins
110488745
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
110488745
NCBI-ProteinID:
XP_021416757
UniProt:
A0A8C7PRU2
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Position
14:9428938..9431560
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AA seq
262 aa
AA seq
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MINTYQTSMPPPPIPPRLGSVSAPGPGHSKPLLRFLIGMIVLQMVLLLGGFTYLYHTDNK
YHKELDSKYLDDMIILKRLEECEKDIQSVLDCKKLVEKYKSILAKVSQEEGRAAKLTGDG
PSYGAMARMIVKQPVSGSPPTKYLEWNIGHSVRKNVQYYMSSWLKVLQPGDYNIYSQVAF
SKWHPKTPLASRVKLRKGETGEEKDLMTAYCSLGDQDHTDVCTAFQGGVFSLEPDDQLSV
WVTDPSLVNYEEGTTTFGLYKL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacttaccagaccagcatgcctccgccacctattcccccacggctaggctct
gtgtcggcaccaggaccaggccacagcaagcctctcctcaggtttctcattggcatgata
gtgcttcaaatggttctgctactggggggattcacctacctgtaccacacggacaacaag
tatcacaaggagcttgacagcaagtacctggatgatatgatcatcctgaagagacttgaa
gagtgtgagaaagacatccagtcagtgctggactgtaagaagcttgtggagaaatacaaa
agcatcctggcaaaggtctcacaagaggaaggaagagctgctaaactcactggggatggg
ccctcgtatggagccatggcacgcatgatagtaaagcaacctgtttctggttcgccccca
acaaagtatctggagtggaacataggccactcagtgcggaagaacgtccagtactacatg
tccagctggctgaaggtgctgcagcctggagactacaacatctactcccaggtggctttc
tccaaatggcaccccaaaacccctctggccagccgggtgaagctgaggaagggggagacg
ggagaggagaaagacctgatgacagcctactgcagcctgggggaccaggatcatacagac
gtatgtacagctttccagggaggagtgttcagtctggagccagacgatcagcttagtgtg
tgggtgacggaccccagcctagtcaactatgaggaggggactaccacctttggattgtac
aagctgtag
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