Oncorhynchus mykiss (rainbow trout): 110491224
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Entry
110491224 CDS
T07259
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
omy04210
Apoptosis
omy04217
Necroptosis
omy04218
Cellular senescence
omy04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110491224
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110491224
04217 Necroptosis
110491224
04218 Cellular senescence
110491224
09144 Cellular community - eukaryotes
04510 Focal adhesion
110491224
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110491224
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
110491224
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C2: calpain family
110491224
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
110491224
NCBI-ProteinID:
XP_036801889
Ensembl:
ENSOMYG00000006333
LinkDB
All DBs
Position
16:complement(5080963..5121150)
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AA seq
700 aa
AA seq
DB search
MTSMAGRLARQQERENGVGTNQQAVKFLQQDYETLLQGCLESGKLFQDPSFPAESKSLGY
KELGKYSSKTKGLMWKRPTELCSNPKFIDDGATRTDICQGDLGDCWLLAAIASLTLDERV
LARVVPPEQSFTDRYAGIFHFQFWQFGEWVDVVIDDRLPTRDGKLLFVHSAEGSEFWSAL
LEKAYAKVNGCYESLSGGSTIEGFEDFTGGIAEMYQLDKAPPHLFKIMEKALGLGSLLGC
SIDITNSYETEAVTALKLVKGHAYSVTGAEEVHLHGDPVQLIRIRNPWGQVEWTGPWSDG
SSEWKYVRPDEKLKLDHVAEDGEFWMSYSDFIRQFSKLEICNLTPDTLASDEVGRWNNYQ
YKGMWRVGSTAGGCRNHPATFCSNPQFLLCLEDVDDDPLDDVDGCTFLVGLMQKDGRRNR
QMGEELSAVGFAIYAVPDEYKGQSNIHLGPDVLLRQKHVAMSSTFINTREVCDRFCLPPG
EYVVIPSTFQPHKNGSFILRVFSEKHAATSEMGSVAAEEVKEIKVAEKDVDPNFKQMFKQ
IAGSDGEVTVFQLVEILNKVFAKRADIKTEGFSLETGRHIVSLLDKDGNSKLGLVEFHKL
WMKIQKYVEIFKSYDSDRSGTMSSHEMRGALTEAGFHINNAVLQVIVNRYASAHYAIDFH
CFVDCLIRVEMLFKMFKTLDTNASGKIELDVSQWLCLAIN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctatggcaggtcggctggcccgtcagcaggagagggaaaacggtgttggaacc
aaccagcaggcggtaaagttcctccagcaggactatgaaacgctgcttcagggctgtctg
gagtccgggaagctgttccaggacccctccttcccagcagagagcaagtctctagggtac
aaagagctcgggaagtactcatccaagaccaaggggctgatgtggaagagacccacggag
ttgtgctcaaaccccaaattcattgacgatggagccaccaggactgatatctgccaagga
gatctgggggactgttggctgctggctgctattgcatcactgaccctggacgagagagtg
ctggccagggtcgttcctcctgaacagagcttcactgaccgctacgctggcatctttcac
ttccagttctggcagtttggtgagtgggtggacgtggtgattgacgaccggctgcccacc
agagatggaaagctgctgtttgttcactcagccgagggctctgagttctggagcgccctg
ctggagaaggcttacgccaaggtgaatggatgctatgagtctctgtcaggtggctccacc
atcgaggggtttgaggacttcacaggagggatagcagagatgtaccagttggacaaagct
cctcctcacctcttcaagatcatggagaaggctcttggcctgggctctctactgggctgt
tccattgatatcaccaattcctatgagacagaggcagtgacagctcttaaactggtgaag
ggacacgcatactctgtcaccggtgctgaagaggtccatctccatggagacccggtccag
ctgattcgcatcaggaacccctggggacaggtggagtggactgggccctggagtgatggt
tctagtgaatggaaatatgtccgtcccgacgagaagctgaagctggatcatgttgctgag
gatggggagttctggatgtcctattcagactttatacgtcagttctccaagctggagatc
tgtaacctgactccggacaccctggccagtgacgaggtgggccgctggaacaactaccag
tataaaggcatgtggagggtagggtctaccgctggaggctgcaggaaccatccagccacg
ttctgctccaacccccagtttctgttgtgtctggaggatgtggacgatgatcctctggat
gatgtggatggctgtactttcctggtgggcctgatgcagaaagacggacggcgcaaccgc
cagatgggagaagagctcagtgccgtcgggttcgccatctatgccgttcctgatgagtat
aagggtcaatctaacatccacctgggaccagacgtgctgctgagacagaaacacgtggcc
atgagcagcaccttcattaacaccagagaggtgtgtgaccgtttctgccttccccctggg
gagtacgtcgtcatcccctccaccttccagcctcacaagaacggcagcttcatcctcaga
gtgttctcggagaaacacgcagccaccagtgaaatgggctcggtggctgctgaagaggta
aaggagattaaagtggcagagaaagatgtggatcccaatttcaagcaaatgttcaagcag
atcgccggcagtgacggagaagtgactgtcttccaacttgttgaaattctgaacaaagtt
ttcgctaaaagggccgacatcaagacagaaggttttagtcttgaaactggacgacacatt
gtcagtcttctagataaagatggaaattccaagttgggactggttgaattccacaagctt
tggatgaagatccagaaatacgtggaaattttcaagagttacgactcagaccgctctgga
actatgagttcacatgagatgagaggtgctctgacagaagcaggcttccacatcaacaat
gcagtgctgcaggtcatagtgaatcgttatgccagcgcccactatgccatcgactttcac
tgtttcgtggactgtctcatcagagttgaaatgctcttcaagatgtttaaaactctggat
accaacgcctctgggaagattgagttggatgtgtcccaatggctgtgcctggcaatcaac
tag
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