Oncorhynchus mykiss (rainbow trout): 110495653
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Entry
110495653 CDS
T07259
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110495653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110495653
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
110495653
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Ortholog
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
110495653
NCBI-ProteinID:
XP_036807884
UniProt:
A0A8K9XIY7
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Position
18:complement(15877503..15928773)
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AA seq
477 aa
AA seq
DB search
MASNSIFESMSSYQPCFIRDPAPGRRFTPPSTTLLSGKMSEGLPLGAQESSSAALVGKLR
IADRGMVEVLSEHPGELVRTDSPNFICSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTV
MAGNDENYSAELRNATAALKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRA
IKITVDGPREPRRHRQKLEDVKTGALAFSERLSELEQLRRSSMRVTPPHHHHHHAPTPNP
RPALNPAQFSNPTHHTQIPDSRQMQTSPSWSYEQSYPYLGQITTPTVHSTTPISPSRSSL
SDLSSRLSGPDLTAFSDPRMSLDRPFSSLTSLPDSRYPDPRMHYPTGAFTYTPTPVSNGA
IGLTMATTPAGRYHTYLPPPYPTNAPQGQSGPFQAGSSPYHLYYSTAAGSYQFSMMAGGG
GERSPPRIFPPCTNASTGSSLLHPSLPNQSEGVGVEAEGSHSSSPTNMVPEAVWRPY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaacagcatctttgaatccatgtcatcctaccagccatgcttcatcagggac
ccagcacctggtcggcgcttcacccccccttccaccaccctgttgtcaggtaagatgagt
gagggtctgcccctgggtgcccaggagagcagtagcgccgccctggtgggaaagctgcgt
attgcagaccgaggcatggtggaggtgctgtcagaacaccctggagaactggtgaggaca
gacagccccaacttcatctgttctgtcctacccacacactggaggtgcaacaagacgctg
cccatcgcattcaaggtggttgcccttggtgatatccctgacggtaccttggtcacggtg
atggcggggaacgatgagaactattcagcagagctccgcaacgccacggccgccctcaag
aaccaggtggctcgcttcaacgacctgcgcttcgtaggccgcagcggaagagggaagagt
tttactctgaccatcacagtgttcaccaaccctccccaggtggccacctaccagagagct
atcaagatcactgtggacgggcccagagaaccacgccgccacagacagaagctggaggat
gtgaagacgggagcattggccttctccgagcgtctgagtgagctggagcagctaaggcgg
agctccatgagggtcacgccccctcaccatcatcaccaccacgcccccactcccaatccc
cggcccgccctgaacccggcccagttcagcaaccccacacaccacacacagataccagac
tctaggcaaatgcagacatctccgtcgtggtcctatgagcagtcctacccctacctgggt
cagataaccacgcccaccgtccactcaaccacgcccatctcacccagccgctcctccctc
agtgacctgtccagccgcctctcaggccctgacctcacagccttcagcgacccccgtatg
tccctggatcgcccgttctcctccctgacctcactccctgacagccgctaccctgacccg
cgcatgcactaccctactggggccttcacatacacccctacccctgtatccaacggcgcc
atcggactgaccatggcaaccacccctgctgggcgttaccacacctacctccccccgccc
taccctacaaacgccccccagggccaaagtggaccgttccaggccggttcctctccctat
cacctgtattatagcacggcagctgggtcctaccaattctccatgatggcggggggaggc
ggggagcggtctcctccgaggatattccctccctgcaccaacgcatccacaggctcctcc
ctcctgcacccgtctctgccaaatcagagcgaaggggtgggggtggaagcggagggaagt
cacagtagctcccctaccaatatggtacccgaggccgtatggcggccatattga
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