Oncorhynchus mykiss (rainbow trout): 110497169
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Entry
110497169 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110497169
03036 Chromosome and associated proteins [BR:
omy03036
]
110497169
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110497169
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110497169
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110497169
UBL E3 ligases
110497169
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
110497169
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110497169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
PWI_Topors
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-rbx1
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
110497169
NCBI-ProteinID:
XP_021428817
LinkDB
All DBs
Position
10:complement(71442408..71446983)
Genome browser
AA seq
904 aa
AA seq
DB search
MAAAKMTLRLRKKSALDKSSEVLSAEASPDSKCPICLDRFNNMAYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDRGLRRMMARLAARRRAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQKNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIHEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHAVYD
CPAPSSDEGSSSNSSVIAISEDEEEGDSVELDPMSGGALSQSTWDDETPGPSYSTTEPTR
ALLLSIRDSDSESSVGEECGAVLQPKTPRLTADSAWVKTDKDGQACTSSGDEDCIIVGFV
KPLAERTPELVKLSSDSEESVLEEIKDEVPRLLQHIRFTSLSPASSQGQCPGKAEGVERK
QDVSCSKERRNTSPSIRCESSSSKSASKNRGQTEKDGRRCHSRDSSRERPRSRSRDRGRR
SRSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDRSHTKWEKTRDNKDSSRSGRSHDS
SSHSYHWHYYSRESERDSSAMLYTERRSYYSSSHRNIDCRSPSQSPDSHRRDKRRSRSRS
STCSPSGAHRKSRHEKPSGKRKYKSRHLEEPSPKDQSSIALDEPPSSTTSSYVKDKKKSK
EKRHRKSKEKSGGKRSRSLSVEIIFEGSSSEQTRKHQKKKKKHKKKGKRHRSKERTGSRK
HSPTVITIDSDSDQHTAEGANDANHTCPVSSSTSNSVLAPSTTTTTGNPADSGLLESMLQ
DWEQQIPPVGLDSGVLEAKPPINVAAASDTPTQSEGVLSQSASADEANSHSPSNDNTSHF
LEES
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctacgcaagaagagtgccctggacaagtcctct
gaggttttgtctgccgaggcgtctccagactctaagtgccccatctgtctggaccgattc
aacaacatggcctacctcgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagctgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaacggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaagaacatcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcgacaggaccgaggcctccgccgcatgatggcgcgcctggcg
gccaggaggcgggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagcgtgcgagacggt
ggccgttcccgggacatctcggcggagttctttcagaagaacccggcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggcgctcacggctccctggtc
aacatcgtgcagcacattatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccacgaggagctgcagcctttcctccaggcccgcaccgatcacttcctgcatgagttt
gtcaacttcgcccgagcacccttcaacatggaggcctacgaccagcatgccgtctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcggtgattgccatctcc
gaggatgaggaggagggcgattctgtggagctggaccccatgtccgggggcgccctgagc
cagtcaacatgggacgacgagacacccggaccttcgtactccacaacagaacccaccagg
gccctgctgctatccatcagagactctgactcagagagcagtgtgggggaggagtgcgga
gcagtgttacagccaaagacccctcgcctgactgcggactctgcttgggtgaaaaccgac
aaggacggacaggcgtgtacctcctctggcgatgaggattgcatcatcgtgggctttgta
aaaccccttgctgaaaggaccccggagctggtcaagctgtcctctgactcagaggagtct
gttctggaggagatcaaagatgaagtgcccaggctgcttcaacacatccgcttcaccagc
cttagccccgcctcctctcaaggccaatgtcctgggaaggcagagggggtggaaaggaag
caagatgtatcgtgctccaaggagagacgtaacacctcaccctcaattagatgtgagtca
tcatctagtaagtcagcaagcaaaaacagaggacaaactgagaaagacggcaggagatgt
cacagtcgagatagctctagagagaggccacggtcgagaagcagagaccgggggaggagg
tccaggagcgccgaccgcagccgctcgaccaagagcccggctatctccatcaacagcgac
agcactctgtccagaggcaggaggcagtcacgctcccaaagccgcgaccgctcccacact
aaatgggagaagacgagggacaataaagatagcagccgatcaggccgcagccacgactca
tcgtcacactcctatcactggcactactacagccgggagagtgagagggacagcagtgcc
atgctctacacagagaggaggtcctactactccagctcacacaggaacatcgattgcagg
tccccgagccagagtcctgattcccaccggcgggataagaggcgctccagaagtcgttcc
agcacctgttcgccgtccggcgctcacaggaagtctcgtcacgagaagcccagcgggaag
agaaagtacaaatcgagacacctggaggaaccttcccccaaagaccagtcctccatagcc
ctcgacgagcctccctcctccaccacctcgtcctatgtgaaagacaagaagaagagcaaa
gagaagcgtcacaggaagtccaaggagaagtctggggggaagaggagcaggagcctcagc
gtggagatcatctttgagggcagctcctcagagcaaaccaggaagcaccagaagaagaag
aagaagcacaagaagaagggcaagaggcacaggagcaaagagcgcacagggtccaggaaa
cactcgcccactgtcattaccatagacagcgacagtgaccaacatactgccgaaggcgct
aacgatgctaaccacacctgcccggtaagcagcagcacaagcaacagcgtgctagcgcct
agcacaaccaccaccacaggcaaccctgcagactctggcctgctggagtccatgttacaa
gactgggaacagcagattccacctgtgggtctggacagtggagtgctggaggccaagcct
cctataaatgttgctgctgcttctgacacacccacacagagtgagggggttctgtcccaa
tctgcctctgcggatgaggcaaactctcatagcccttcaaatgacaacacaagtcatttt
ttggaagaatcataa
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