Oncorhynchus mykiss (rainbow trout): 110498741
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Entry
110498741 CDS
T07259
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110498741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498741
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110498741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
110498741
NCBI-ProteinID:
XP_036811657
Ensembl:
ENSOMYG00000022961
LinkDB
All DBs
Position
20:11372725..11404820
Genome browser
AA seq
1221 aa
AA seq
DB search
MNVNQQTPMASPYGPPQPGYGQPSYAPLGGGYPGPYGPYNGPAAAYQPGAPPQGYSPYAS
FPSKAVAANPVSDLSSPLDLGPARGPLTSAPRPVSTPQAYSQYPQGDSQNGPPPMDHSMA
QPAHRSPVSQPYSQGAMNLSGPHPSYSQQYGAPPPMQQVTNQMSGMQIGSGPPTSVGPGY
AHHPSTQPPISAAYSSAAPPSYTQAPPLSAAPSQPPPPSEPAASQPYYGGPPPPQQQPFP
SAHHPSQPFVSSSPYLGPPSQPQAPPVSQQQSFPPGPPAQQPFPNSAPPPVSQASYSGPP
PLTQHSFPPSSQSGPFPPISISPSQYPGPQPQSQPGPPPFHSGPSPRGPVPPPSMSQQQA
NHLPPGPMQQQQPPQPGMQGGYPTQQNGAFGQPRGPQPGYAGPQYPGQQNYGAGPAPAPA
PPAQKRLDPDSIPSPQASELPAVQKSRHRIDPDAIPSPIQVIEDDRVNKSSEPFTTGVKG
QAPPLVTTNFQVKDQGNASPRFIRCTAYNMPCTADMAKQSQVPLAAVIKPLAMLPPDETP
PYIVDHGEGGPIRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRV
DCYDRPELSQGSYEFVATVDYCKNNKLPQPPSFIFFIDVSYNAVKSGMVNIVCQELKTLL
DYLPRENPEADSVVRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVSDMFLPLLDGFLVGV
NDSRMVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLFVFHSTLPIAEA
PGKLKNREDKKLVGTDKEKSLFQPQSGFYSNLSKECVAQGCCVDLFLFPNQYVDVATLGV
VPVSTGGSVYKYTYFQAETDRERFLNDLRRDVQKPMGFDAVMRVRTSTGIRATDFFGSFF
MSNTTDVELAGLDCDKTVTVEFRHDDKLSEDTGALMQCAVLYTSCSGQRRLRVHNMAVNC
CSQLADLYRNCETDTIINFFSKYAYRSILNTPTKTVRDTMVNQCAQILACYRKNCASPSS
AGQLILPECMKLLPVYLNCVLKSDVLQPGADISLDDRAYLRQLLSCMDVSESHIFFYPRL
LPLVKLDGGSLPMAVRNSEERLSKGGVYLLETGLHLFLWVGANAQQELLSNIFGTPTFSQ
IDPNMTSLPELDNPFSQRLREIIDSFRSQRSRYMKLMVVKQEDKAELIFKHFLCEDKSTS
GGASYVDFLCHMHKEIRQLLS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaccagcagactcccatggcgtctccgtacggcccgccccagcctggctat
ggccagcccagctacgctcccctgggagggggctaccctggcccctacggaccctacaac
gggcccgctgcagcctaccagcctggggctccaccacaaggttactctccctatgccagt
tttccctctaaggctgtggcagctaaccctgtctctgacctgtcctctcctcttgactta
ggacctgccagaggcccccttacctctgccccccgtccagtctccaccccccaggcgtac
tcccagtatccccagggagactctcagaacggacccccacctatggatcactctatggcc
cagccagctcacaggtcgccagtgtctcagccatatagccaaggtgctatgaacttgtct
gggccacacccctcctactcccagcagtatggtgctccaccccccatgcaacaggttacc
aatcagatgtcagggatgcagatcgggtccggtccccccacctctgttgggccgggatat
gctcaccatcccagcacccagcctccaatcagtgctgcatactcctctgcagccccaccc
tcctatacgcaagctcccccattgtctgctgccccctcccagcctccccctcccagtgaa
cctgcagcctcccagccttactatggtggcccccctcccccccaacaacaaccattcccc
tctgcccaccatccctcccaacccttcgtctcctcctctccatacttgggccctcccagc
caacctcaggcccctccagtctcccaacagcagtccttcccacctggcccccctgctcag
caacccttccccaactctgcccctcctccagtctcccaggcctcctactctggtccccct
cctctcacccagcactctttccctccctcctcccaatctggccccttcccacccatctct
atatccccttcccagtacccaggtccacagccccagtcccaacccggaccccctcccttc
cactctgggccctctcctcgaggccccgttccacccccctccatgtcccagcagcaggcc
aatcaccttccccccggccccatgcagcaacagcagcctcctcagcctggcatgcaggga
ggatacccaacccagcaaaatggtgcgtttgggcagcctagagggccccagcccggctat
gcaggcccgcaatatcccgggcaacagaactacggagcaggccctgcccctgcacccgct
ccccctgcacagaagagactggaccctgattccatccccagcccgcaagcgtctgagctg
ccggctgtgcagaaatcgagacatagaatagatccagacgctatccccagcccaattcag
gtgattgaggatgaccgggtcaacaagagcagtgagccgttcaccactggggtcaaaggt
caggctccacccctggtcaccaccaacttccaggtgaaagaccagggcaatgccagcccg
cggttcatccgctgtacagcctacaacatgccctgcaccgctgacatggccaaacagtcc
caggtccccttggccgctgtaatcaaacccctggctatgctgccccccgacgagacccct
ccgtacattgtggaccatggggaaggcggtcctatccgctgtaaccgctgtaaggcctac
atgtgtccctacatgcagttcatcgagggcggacggcgcttccagtgtggcttctgcagc
tgcgtcacagaggttcctccccactacttccagcatctggaccacacagggaagagggtg
gactgctacgatcggccagagctctctcagggcagctacgagtttgtggccaccgtcgac
tactgtaagaacaataagctcccccagcccccgtcgttcatcttcttcatcgatgtgtct
tacaacgccgtgaagagcggcatggttaacatcgtctgtcaggagctcaagactctactg
gactacctgcccagggagaatccagaggcagactcggtggtgcgtgtgggttttgtgacc
tacaacaaggtgttgcacttctacaacgtcaagtccagcctggcccagccccagatgatg
gtggtcagtgacgtcagtgacatgttcctccctctgctcgacggcttcctggtcggcgtc
aacgacagccggatggtcatcgagagtttgctagaccagattccggagatgtttgcagac
accagggagactgagacggtgtttggaccagtcattcaggcaggactggaggcactgaag
gctgcagactgtgccgggaagctgtttgtgttccactccactctgcccatcgctgaggct
cctgggaaactgaagaatagagaggacaagaaactagtgggaacagacaaggagaagtct
ctgttccagccccagtctggtttctatagtaacctctctaaggagtgtgtagcacagggc
tgctgtgtagacctcttcctgtttcccaaccagtacgtcgacgtggcaacgcttggcgtg
gtgcccgtctccaccgggggttccgtctacaaatacacctacttccaggccgagacggac
cgtgagcggttcctgaatgatctgcggcgagacgttcagaagccgatgggcttcgatgct
gtcatgagggtccgaaccagcacaggtatcagagcgacagatttcttcggctcgttcttc
atgagcaacacgacagacgtggagctggcaggcctggactgtgacaagactgtcaccgtg
gaattccgccacgacgacaagctcagcgaggacaccggtgcgctcatgcagtgcgcggtg
ttgtacaccagctgtagtggtcagcggcgtctgcgggtccacaacatggcggtcaactgc
tgctcccagctcgccgacctctaccggaactgcgagacggacacaatcatcaacttcttc
tccaagtacgcgtaccgtagcatattgaacacccccaccaagacagtgagagacaccatg
gtgaaccagtgtgcccagattctggcctgctaccgcaagaactgtgccagcccctcgtct
gccggacagctgatcctaccagagtgtatgaagctgctgccggtctatctgaactgtgtg
ttgaagagtgacgtgctgcagccgggagctgacatctcattggacgacagagcctacctg
agacagctgctcagctgtatggacgtatcagagagccacatcttcttctatccccgccta
ctgcccctggtgaagttggatggagggtcgttgccgatggcagtgcgtaactcagaggag
cgcctgtcgaagggcggagtctacctcctggagacagggctccacctcttcctgtgggtg
ggagccaatgctcagcaggagctgcttagcaacatctttggaacgcccaccttcagccag
atagaccccaacatgacgagtctgccggagctggacaacccgttctcccagagactccga
gagatcatcgactccttcaggtcacaacggtcacgatacatgaagttgatggtggtgaag
caagaggacaaggcggagctaatctttaagcacttcctgtgtgaggacaagagcaccagc
ggaggagcttcctatgtcgacttcctgtgtcacatgcacaaggagatccgccagctactc
agctag
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