Oncorhynchus mykiss (rainbow trout): 110501493
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Entry
110501493 CDS
T07259
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110501493
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110501493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
PFF1_TM
GPHH
IQ
FraC
Motif
Other DBs
NCBI-GeneID:
110501493
NCBI-ProteinID:
XP_021434767
Ensembl:
ENSOMYG00000031224
LinkDB
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Position
22:complement(16045523..16088614)
Genome browser
AA seq
1991 aa
AA seq
DB search
MAQLLVPPGPDSFRLFCRESLDAIERRIAEENAKKPKGKPNDDGDNGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLSPFNPLRRIS
IKVLVHSLFSMVIMFTILTNCAFMTLSQPPDWAKNIEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTSFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIRPNSTNLLNDTLDFNGKEYND
GDFNETVPFNWTNYTNNPDNYYFLPGKRDALLCGNGSGAGLCPEGFWCVKAGRNPDFGYT
SFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVA
MAYDEQNQATMEEAQKKEEEFQAMLEQLRRQQEDAQAAATVMAAESGEFSERGDLTESSS
EASKLSSKSAKERRNRRKKRKQREEEEREENDKCHRSESESSMKKSHFRFSMDASNLHNY
DMSCSTPYQSFLSIHGPLFSSRRNSRASLYSFRDRARDIGSENDFADDENSTFEDNDSRR
GSLFVPRRSDRRSSNVSQNSMPSHVVLPANGKMHSSVDCNGVVSLVGGASLPKSPEGLLQ
PEENTSETEYRKARYGSYQATMDFLEDPVARQRALSVASVITNTMEELEESRQKCPPCWY
KFANTFLIWDCCPKWLRIKKIVKMIVMDPFVDLAITICIVMNTVFMAMEHYQMSGEFNTM
LYVGNLVFTGIFTAEMCFKIIALDPYIYFQEGWNIFDGIIVSLSLMELGLANVSGMSVLR
SFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDC
VCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLMVMVIG
NLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIDRIHQGVAFLKALVRRSFQSICL
RKKKRSLNEDTTLDDLHKTMGTNWNSNHTTVEIMKDPDYIKDGNGATSGLGVGVCSNAAG
KYIMNDNTDYMPFIHNASLTVTVPIALGESDLNTEDFSSDSSDIEESKEQLSEDHPLSSS
EGSTVDIRPPGEGEGSVGMEPEESMEPEGCFTDGCVRRFQCCQVNVDEAKWKMWWTLRKT
CFRIVEHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTVLEFADKVFTHIFILEMLLK
WVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITTQERFKVRDV
ANKTECLALEGAYWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPDYE
VNLYMYMYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPANKFQGYVFDFITKQAFDIVIMILICLNMVTMMVETDDQTDDMDGILY
KINLVFIVMFTGECILKMFSLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYFVSPTL
FRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAY
VRKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSRKEHPGSKYKG
GDCGNPPVAIIFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWE
KFDARATQFMEYEKLSDFADALDPPLRISKPNKIQLIYMDLPMVSGERIHCLDILFAFTK
RVLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSALIIQRAFRRYLLRR
IVKRASAMYKEKMLLDKEVLVIDKFNEISTSDRTDMTYSTGSPPSYDSVTKPEKNKYEKV
KREKEVKKKKK
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtacctccaggaccagacagcttccggctgttttgtcgtgagtcc
cttgatgccatcgagaggcggatcgctgaggagaacgccaagaaacccaaggggaagccc
aatgacgatggcgacaacggacccaagcccagcagtgacctggaggcaggcaaatcactg
ccactcatatacggggacattcccaaaggattggtgtccacaccactggaggacctggac
accttctacagcaaccagaaaacctttatagtattgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaagccccttcaaccctcttagaagaatatca
attaaggttttggttcactcattgttcagcatggtaatcatgttcaccatccttaccaac
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatatagagtacacattc
actggaatttatacatttgagtctcttataaaaatattggcaaggggcttctgtgtcggg
aagttcacctttcttcgagacccatggaactggttggatttctgtgtcattgtcatggca
tatgtcacatcgtttgtggacctgggcaacgtgtcagcactgagaacgttcagggttctc
cgagcactgaaaacgatatcggtcatcccaggcctcaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctagtagggctgcagctgtttatgggcaatttgagaaacaaatgtttaaggatccgt
cctaactcaaccaacctcttgaatgatacgttggactttaatgggaaggagtataatgat
ggggactttaacgagaccgtcccgttcaactggaccaattacactaataatcctgataat
tattacttcctcccaggtaaaagggatgctttgctttgtggaaatggcagtggtgctggg
ctgtgtccagagggattctggtgcgtcaaagcgggccggaacccagacttcggctacacc
agctttgacacgttcagctgggccttcctgtctctgttcagactgatgactcaggactac
tgggagaacctctaccagcagaccctgcgggctgctgggaagccgtatatgatcttcttt
gtgctggtcatcttcctgggctccttctacctgatcaacctgatcctggcggtggttgcc
atggcgtacgacgagcagaaccaggccaccatggaggaggctcagaagaaggaggaggag
ttccaggccatgctggagcagctgagaagacagcaggaggatgcacaggcggcggcaacg
gtgatggcggctgagagtggggagttcagtgagagaggggacctcactgagtcctcctca
gaggcctccaaactcagctccaagagcgccaaagagaggcgcaacaggcgcaagaagagg
aagcagagggaggaggaggagagagaggaaaatgacaagtgtcacaggtctgagtccgaa
agcagtatgaaaaagagtcacttccgcttctccatggatgcctctaacctgcacaactat
gacatgagctgttcaacaccataccagtccttcctgagtatccacggacccctgttctcg
tccagacggaacagccgggctagcctctacagcttccgggaccgtgcgcgagacataggc
tcggagaacgactttgccgacgatgagaacagcactttcgaggacaacgacagtcgccgg
ggttctctgtttgtccctcggcggagcgaccggcgctccagcaacgtgagccagaacagc
atgccatcacacgtcgtgctgccagcaaatgggaagatgcacagctccgtcgactgcaac
ggggtggtgtccctagtgggcggggcttcactccccaagtcacctgagggactccttcag
ccagaggaaaacacttcggagacagagtatagaaaggcccgatatggatcgtaccaggcc
actatggacttcctggaagacccagttgccaggcagagggcgctcagtgtagctagtgtt
ataaccaacactatggaagaacttgaagaatcgagacagaagtgccctccttgctggtac
aagtttgccaacaccttcctcatctgggactgttgtccgaagtggctgaggatcaagaaa
atagtcaagatgatcgtgatggacccgtttgtagacctagctatcaccatatgtattgtt
atgaacacagtgttcatggctatggagcattaccaaatgtctggggagttcaacaccatg
ctttatgtgggaaacctggtgttcacgggtatcttcacagctgagatgtgtttcaagatt
attgctttggatccatacatttattttcaggaaggctggaatatatttgatggtatcatt
gtcagtttgagcttgatggagcttggcttggccaacgtgtctggaatgtctgtcctcaga
tcattccgattgctgagagtattcaaactggccaagtcttggcccacactgaacaagctg
atcaagatcattggtaactcagtgggggccttgggtaatctcaccctcgtactggccatc
attgtcttcatcttcgccgtggtgggcatgcagctttttgggaagagctacagagactgt
gtgtgtaagatctctacagactgcacactgccccggtggcacatgcatgacttcttccac
tccttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatgtgggactgt
atggaggtggctggtcagagcatgtgtctcatcgtcttcctgatggtcatggtcatcggg
aacctagtggtcctgaatctgttcctggccttgctgctgagctcgttcagtgctgataac
ctggcggccacggatgatgacagcgagatgaacaatctgacggtggccatagaccgcatc
caccagggcgtcgccttcctcaaggccttggtgcgccgctctttccaaagcatctgtctg
aggaagaagaagaggagcctgaacgaggacacgaccctggatgacctccacaaaaccatg
gggaccaactggaactccaaccacaccactgtggagatcatgaaagaccccgattacata
aaggatggcaatggcgccaccagtgggttgggagtgggggtgtgcagcaatgcagcaggg
aagtacataatgaatgacaacactgactatatgccgttcatccacaacgccagcctgacc
gtcacagtgcccatcgctttgggagagtcggacctcaacactgaggacttcagcagcgat
tcctcggacatagaggaaagcaaagagcagctatctgaagaccatccgctgagctcctca
gagggcagtacagtggacattaggcccccaggagagggagagggctcggtgggcatggag
cctgaggagtccatggaacctgaaggctgcttcactgatggatgtgtccgcagattccaa
tgctgccaagtgaacgttgatgaggccaagtggaagatgtggtggacgttgagaaaaact
tgtttcaggatagtggagcacaactggtttgagagctttatcatcttcatgatcctgctc
agcagtggagcgctggcatttgaggacatctacatcgagaagaggaagacgattaagacg
gtgttggagtttgcagacaaagtcttcacccacatcttcatcctggagatgttgctgaag
tgggtggcctatggattcgccaaatacttcaccaacgcttggtgctggctggacttcctc
attgtcgacgtgtctcttgtcagccttgtggccaacgccctgggctacgctgagctgagt
gccatcaagtccctgaggactctacgagcactgaggcccctgagagcgctgtcccgcttc
gagggaatgagggtggtggtcaacgctctgctcggagccatcccctccatcttcaatgtg
ctgctggtctgcctcatcttctggctcatcttcagcatcatgggcgttaacctgtttgca
gggaaatactaccattgtgtcaacatcaccacacaggagcgcttcaaagttagagacgta
gctaacaagacagaatgtttggctttggaaggtgcctactggaagaatgtcaagatcaac
tttgataacgtgggagcgggctatctggcactgttacaagtggctacattcaaaggctgg
atggacatcatgtatgcagctgtggactctcgcaatttggaagatcaacccgactatgaa
gttaatctgtacatgtatatgtactttgtggtattcatcatatttggatccttctttaca
ctcaacctcttcattggtgtcattatagacaacttcaatcagcaaaagaaaaagtttgga
ggtcaagacatcttcatgacagaggaacagaagaaatactacaatgctatgaagaagctt
ggctcaaagaaaccccaaaagcctatcccaaggccagcgaacaagtttcaaggatatgtc
tttgatttcattacaaagcaagccttcgacattgtcatcatgattctcatatgccttaat
atggtcaccatgatggtggagacggacgaccagacggacgacatggatggaattctctat
aagatcaacctggtgtttattgtcatgtttaccggagagtgtattctgaagatgttctca
ctccgccaatactacttcaccattgggtggaatgtatttgactttattgttgttatcctg
tcgataattggtatgtttctgtctgaactgatagagaagtactttgtttcaccaacctta
ttccgagtcattcgactggcccggattggtcgcatccttcgcctcatcaagagtgccaaa
ggaatccgtacactcttgtttgctttgatgatgtcacttcctgccttgttcaatattggt
ctcctgctcttcttagtgatgtttatctatgccatctttggcatgtcgaactttgcatat
gtcaggaaggagtctgggattgatgacatgttcaactttgagacatttggcaacagcatg
atttgcctgttccagatcaccacgtcagctggctgggacggcctgctggcacccatccta
aacaagagagagccagactgtgacagccgtaaagagcacccaggcagcaagtacaagggg
ggagactgtgggaatccccctgtagccattatcttctttgtgagctacatcataatctgt
tttctcattgtggtcaacatgtacattgctgtcatcctggagaacttcagtgtggccact
gaggagagcgctgagcccctgagcgaggatgactttgagatgttctacgaggtctgggag
aagtttgatgcacgggccacccagttcatggagtatgagaagctgtctgacttcgctgat
gccttggaccccccgctacgcatttctaagcccaacaagatccagttgatctacatggat
ttgcccatggtgagtggggagcgcatccactgcctggacatcctgtttgccttcaccaag
cgcgtcctgggtgagggcgaaggcttggacatcctccgtggtcaaatggaggagcgcttt
atggcctccaacccctccaaggtgtcctacgaacccatcaccaccacgctacgccgtaaa
caagaagacatgtctgccctgataattcagagagctttcagacgatatctgctcagacgt
attgttaaacgggcctctgccatgtacaaagagaagatgctccttgataaagaggttctc
gtcatagacaaatttaacgagatctctacttcagacagaactgacatgacatactccaca
ggctctcccccatcatatgacagtgtcacaaaaccagagaaaaacaaatatgaaaaagtc
aagagagagaaggaggtgaagaagaaaaagaagtga
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integrated database retrieval system
