Oncorhynchus mykiss (rainbow trout): 110501544
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Entry
110501544 CDS
T07259
Symbol
stat1b
Name
(RefSeq) signal transducer and activator of transcription 1b isoform X1
KO
K11220
signal transducer and activator of transcription 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217
Necroptosis
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04625
C-type lectin receptor signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110501544 (stat1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110501544 (stat1b)
04621 NOD-like receptor signaling pathway
110501544 (stat1b)
04625 C-type lectin receptor signaling pathway
110501544 (stat1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110501544 (stat1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110501544 (stat1b)
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
110501544 (stat1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STAT_alpha
STAT_bind
STAT_int
STAT_linker
SH2
THP2
Motif
Other DBs
NCBI-GeneID:
110501544
NCBI-ProteinID:
XP_021434870
Ensembl:
ENSOMYG00000012734
LinkDB
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Position
22:19133734..19173341
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AA seq
739 aa
AA seq
DB search
MAQWFQLQQLDSKYLEQVDQLYDDTFPMEIRQYLSTWIESHDWDMVAISDSLAAVRFHDL
LAQLDVQYSRFALENNFLLQHNIRKIKRNLQDHFQEDPLQMAMIICNCLKEEKKILASII
KKEDNVGSTPNNMVLEKQKELDNNVKDLRNRVQVSEHEIKSLEDLQDEHDFKKKTLQSRV
EQEVNGMAQSQAVWKEIREEEIVIRKMFIKLNITRQVVVNQISDILCLAEQIQFNLVTVE
VPEWKHRQQIACIGGPPNACLDQLQIWFTAVAEGLQQVRQQLKMLQELEQKYTYENDPVT
QGKSALEERALALFKYLIVNSIVVERQPCMPTHPQRPMVLKTGVQFTVKIRLLVKLQEFN
YQLKVKAVFDKNVTEKSTVRGVRKFNILGTNTKVMNMEESNGSLAAEFRHLQLKEQKVTG
NRSNEGPLIVTEELHSISFETQLCQPGLQVELETMSLPIVVISNISQLPSAWASVMWYNM
LTCESKNLSFFLSPPQATWSQLSNVLSWQFSSITKRGLNDEQLSMLGDKLLGGEAAGNPN
GLIPWTKFCKNVNEKSFPFWLWIEGILDLIKRHLLCLWNDGCIMGFVSKEREKALLKDKE
PGTFLLRFSESSREGAITFTWVEGYNNDVHFHAVEPYTKKELAAVSFPDILRNYKVMAAE
NIPENPLLYLYPNIPKESAFTRYYSRPTEAAEPMELESASEAGYIKTEIISVSEVCALPS
QTNLPSSGGAQENLLMSNW
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtggttccagctgcagcagctagactccaagtacctggagcaggtggaccag
ctgtatgatgatactttccctatggaaatccgccagtacctcagtacctggatagagagc
catgactgggacatggtggccatcagcgattctcttgcagcggtccgtttccatgacctc
ctggcccagttggacgttcagtacagccgcttcgccttggagaacaacttcctgttgcaa
cacaatatacgcaagattaaacgcaacctgcaggaccacttccaggaagaccctttgcag
atggccatgataatctgtaactgtctgaaagaggagaagaagatcctggcctccatcatc
aaaaaagaggataatgtggggtccacaccaaacaacatggtgttggagaaacagaaggag
ctggacaacaacgttaaagacctgaggaaccgagttcaggtttcagagcatgagattaag
tcactggaggacctacaggatgaacacgacttcaagaagaagaccctgcagagccgagtg
gaacaagaggtgaatgggatggcacagtcacaggcggtatggaaagagatccgcgaagag
gagattgtcatcagaaagatgttcatcaaactcaacataaccagacaggtggtggtgaat
cagatttctgacatcttgtgcttggccgagcagatccagttcaacctagtgacagtggag
gtacctgagtggaagcacagacagcagatagcttgcatcggtggtccgcctaacgcctgt
ttggaccagctacaaatctggttcactgctgtagcagagggcttacagcaggtacgtcag
cagctgaagatgctccaggagctagaacagaagtacacgtacgagaatgaccccgtcact
cagggcaaaagcgctctggaggaacgcgctctcgccctgttcaagtacctcattgtcaat
tctatcgtggtggagagacagccctgtatgcccactcaccctcaaagacccatggtgctg
aagactggggtgcagttcactgtcaaaatcagactcctggtgaagctccaggagttcaac
taccagctcaaagtcaaagctgtgtttgacaagaacgtcactgagaagagcacagtgaga
ggggtccggaaattcaacatcttgggaaccaacactaaggttatgaacatggaggagtcc
aatggaagcttggcagcagaattcagacacctgcaactaaaggaacagaaagttacaggc
aacagatcaaatgagggtcctctcatagtgacggaggagctccactctattagctttgag
actcaactctgtcagccaggactccaggtcgaactagagacaatgtccctgcccattgtg
gtcatctccaacattagccagctgcccagtgcctgggcctctgtcatgtggtacaacatg
ctgacctgtgagtccaagaatctgtcgttcttcctgagccctcctcaggccacctggagc
cagttgtcaaacgtgctgagctggcagttctcctccataaccaagcgaggcctcaacgac
gagcagctgagcatgctgggagacaagctcctgggtggagaagcagccggaaaccctaat
gggctcatcccctggaccaagttctgcaagaatgtgaatgagaagagctttcccttctgg
ctgtggatcgagggaatactggacctgatcaagagacacctgctgtgtctgtggaatgat
gggtgtatcatgggctttgttagtaaggagagagagaaggccctgctgaaggacaaggag
cctggaacgttcctgctgcgcttcagtgagagcagccgagagggagccattaccttcacc
tgggtggagggctacaataatgatgtccatttccacgcggtggagccctacactaagaag
gagctggccgccgtctcttttcctgacatcctccgcaactacaaggtgatggctgccgag
aacatccctgagaaccctctgctctacctctaccccaacatccccaaagagagcgccttc
acacgctactacagccgccccacagaagctgctgagccaatggagttggagagtgcctct
gaggctggctacattaagacggagatcatctctgtgtctgaagtatgtgcactcccttcc
caaactaatctgccctcttcaggtggtgcccaggaaaatttgttgatgtccaattggtag
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