Oncorhynchus mykiss (rainbow trout): 110501761
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Entry
110501761 CDS
T07259
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04518
Integrin signaling
omy04672
Intestinal immune network for IgA production
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110501761 (itga4)
04514 Cell adhesion molecule (CAM) interaction
110501761 (itga4)
04517 IgSF CAM signaling
110501761 (itga4)
04518 Integrin signaling
110501761 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110501761 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110501761 (itga4)
04810 Regulation of actin cytoskeleton
110501761 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110501761 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110501761 (itga4)
04515 Cell adhesion molecules [BR:
omy04515
]
110501761 (itga4)
04090 CD molecules [BR:
omy04090
]
110501761 (itga4)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110501761 (itga4)
Exosomal proteins of other cancer cells
110501761 (itga4)
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin alpha subunits
110501761 (itga4)
CD molecules [BR:
omy04090
]
Proteins
110501761 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
DUF6479
Motif
Other DBs
NCBI-GeneID:
110501761
NCBI-ProteinID:
XP_036815019
Ensembl:
ENSOMYG00000018259
UniProt:
A0A8K9Y014
LinkDB
All DBs
Position
22:complement(31736087..31774012)
Genome browser
AA seq
1020 aa
AA seq
DB search
MERKKPVNLYCCWTFLLAWCCSLTDCYNLDVDHPVSFSGPNGSLFGYSVLLHKNKQHTWL
LVGAPVANSTFDPTLIKPGAIYKCNFSGNRECQQISTGVDSCGKTCFSESDNQWLGVSLS
RQPSDGHVLACGHRWKNVFYSRKDNQNKLPHGVCYRYEADLKQSQPLIPCYKDHQRKFGE
DYGSCQAGISNFLNEDLIIMGAPGTSYWTGSVLVYNTSSMVLSAYVDDDSTVLYGSYLGY
SVGAGHFLHPDSTEIVGGAPQHRQTGKAYLFRAEENMLKIISEVKGSKLGSYFGASVCAV
DLNGDGLSDLLVGAPMYSTTREEGRVHVYINQGAANMKEAEFQLAGSKSYAARFGETITD
LGDIDDDGFPDVAVGAPQEEELRGAIYIYNGRKTGISQTYSQRITGSLLGNELKMFGQSV
SGGIDVDGNGYQDVAVGAFLSDSAVVLRTRPVVVVEASMLLPVSVNRSVALCSDNGLPAV
CINVTVCFRVRARRYNGLIELQYNLTADTHHKESFPSRFHFHGNGTSNVTTGQVKARHDQ
LTCITHQAFMRKDVRDIFTPIHFEATYALRQHPVHTWGFRIFPALKPILQQRGGHSNLVA
NKTEFARYCSLANCSTNLQVSAYLVLPQKHNNIQYFALGNGKTIMLNTTLVNAGDDAFLP
RLQLRFPSNLHYIKVLDAVKEKYVSCDISEENKTIVGMDCSVGNLYFSSGAKVNISFLLD
VNQSSSAGDISISINTFGDNSENEDLLHDNSATLMLPLRYGVDVSVHGFVTPTSFVFGDQ
EPTPIDCYTETFNYTYKVVNIGPSKSLNTEVEIDIPKILSPYPYRLLHIADFQTSLGECS
IKNGSITVEDDCEVPRSSLIKELVFFFSKTSKRKMFCAHGDDLCLTLVCRLGDMDIGKEA
TIQMEVKLNPTVLQLTPGRHGVMLIESTGIITSPREDPHTILLQQTPIAQVVLEAHFNQK
PQAAVEGFIIVGSLLVGLLILALLIFALWKAGFFKRQFKKEIRRDSWDYVPKSEKTESIS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaagaagccggtgaatctttattgctgttggacctttcttctcgcttggtgc
tgtagtctcactgactgttacaatttggatgtagaccatccggttagtttcagtggccca
aatggatctttatttggatattctgtgttgttacataagaacaagcaacacacatggtta
ttagtcggagctccagttgcgaattcaacattcgatccaacccttataaaaccaggagca
atttataagtgcaacttctcaggcaatagagaatgtcagcaaatatcaacgggtgtggac
agttgtgggaagacttgcttctctgaaagtgacaaccagtggctcggagtcagcctgtct
agacagcctagtgatggccatgtattggcatgtgggcatcgttggaagaacgtgttctat
tccaggaaagacaaccagaacaagctacctcatggtgtctgctacagatacgaagctgac
ctcaaacagtctcaaccacttatcccatgctataaagatcatcaacggaagtttggtgaa
gactacggatcatgccaagcaggaatatccaactttctgaatgaggacttgataataatg
ggagcccctgggacatcgtactggactgggtctgttctggtctacaacacctccagtatg
gtcctgtctgcctatgtggatgacgacagcactgtactctatggcagttatctgggctac
tcggttggcgccggccacttccttcaccctgactccacagagatcgttggaggtgcaccc
cagcacaggcagactggtaaagcctacctattcagagctgaagaaaacatgctgaagatc
atcagtgaagtcaagggaagcaagctgggctcgtattttggtgccagtgtgtgtgccgtg
gacctgaatggagatggcctgtctgatctactggtaggagctcccatgtacagcaccacg
agagaggagggacgagtccatgtctacatcaaccaaggagctgctaatatgaaggaagca
gagtttcagttggctggaagcaaatcgtatgctgcaagatttggggagaccataaccgat
ctgggagatattgatgacgatggctttcctgatgtggcggtgggggctccgcaggaggaa
gagctgcgtggggctatatatatctacaatgggaggaagacagggatctctcagacctac
tctcaaaggatcaccgggtctcttctgggtaatgagttaaagatgttcggccagtctgtt
tccggaggcatcgatgttgacggaaacggttaccaagacgttgcggtaggggccttcctc
tcggactccgctgtggttctgaggacacgtccggtggtagtggttgaggcctccatgctc
ctgcctgtcagtgtgaaccgctctgtagcgctatgttctgacaacggtcttcctgctgtc
tgcatcaatgtgacagtctgcttcagggtccgcgctcgacgctacaacggactcatagaa
ctgcagtataacctgacagccgacactcaccacaaggagtctttcccctcccgcttccat
ttccacggcaacgggacgtccaacgttacgacagggcaagtcaaggccagacacgaccag
ctgacctgcatcacccaccaggccttcatgaggaaagatgtccgggatatcttcacgccc
atccattttgaggcgacgtacgccctcagacagcaccctgtccatacctggggattcaga
atattcccagccctgaaacccatcctgcagcagagaggggggcacagcaacctggtagcc
aataagactgagtttgctcggtactgttcattggccaactgttcaaccaatctgcaggtc
tctgcatacctggtcttaccacagaaacacaacaacatacagtactttgcattgggcaat
gggaagaccatcatgttgaacacaaccctggtgaacgctggagatgatgccttcctcccc
aggctccagttacgcttcccctccaacctgcactacatcaaagtgcttgatgcagtaaag
gagaagtatgtgagctgtgacatttcagaggagaacaagacaatagtaggaatggattgt
agtgttgggaacctgtacttcagctctggagccaaggtgaacatcagctttctgttggat
gtaaaccagagtagcagtgctggtgacattagcatatccatcaacacttttggagacaat
tctgaaaatgaggatcttctgcatgacaactcagccactctgatgttaccgttgagatat
ggcgtggatgtcagtgtccatgggtttgtgactccaacatcctttgtatttggtgaccag
gagcctactccaattgattgctacacagagacattcaactacacttacaaggttgtcaat
atcggtccaagcaaatctctcaacacggaagttgagattgatattcccaagatactatca
ccatatccatacagattactccacattgcagattttcagacctctcttggagaatgctcc
attaaaaacggctccatcacagtagaagatgattgtgaggtgccacggtcgtctttaatc
aaggaactggtcttcttcttctccaaaaccagcaaacgcaaaatgttctgtgctcacgga
gacgacctgtgcctgactctggtgtgtagactaggagacatggacattgggaaagaagcc
accattcagatggaagtgaagctcaaccccactgttctacagctcacaccgggtcgtcat
ggagtgatgctgatagagagtactggcatcatcacatcaccaagggaggaccctcacacc
atcctattacagcagacccctattgctcaggttgtgttggaggcccacttcaaccagaag
cctcaggcagcagtggaggggttcatcattgtagggagtctactggtgggactcctgatc
ctggccctgctcatcttcgccctctggaaggctggtttcttcaagaggcagtttaagaag
gagatcaggagggatagctgggactatgtaccaaagagtgagaagactgagagtatatcc
taa
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