Oncorhynchus mykiss (rainbow trout): 110505181
Help
Entry
110505181 CDS
T07259
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110505181
03015 mRNA surveillance pathway
110505181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110505181
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110505181
mRNA cycle factors
P-body specific factors
110505181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
110505181
NCBI-ProteinID:
XP_021439887
Ensembl:
ENSOMYG00000046629
UniProt:
A0A060Y6J4
LinkDB
All DBs
Position
31:41227590..41232363
Genome browser
AA seq
452 aa
AA seq
DB search
MKDGKENTRQREKRMEIKCENIENMEKPKQEKKEVMTKIIIRRLPPSITKEELEEQLQPL
PEVDYLEFFSNDSSMYPHVFARAYINFKIQEDIVLFRDRFDGYVFVDNGGQEYPAIVEFA
PFQKIAKRRSKKKDAKSGTIDEDADYKKFLEIYNGDDEKFTSTPETLLEEIEAKTKELVA
KKMTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRRWREEDRRKRKEAEKFKKGD
KPSEKDKDQAKEVPKIKLLRKPDRGDDVEKLKKPEKDKMKDDRAPGCPDMTKRQNFETRG
DRVSRKADEDGHKDFRERDLERDRNRERDKERERRQKEKERIRRQDEDRRRRRERHDGEN
SYRKQEEEGKREKEDRVWEKRRGENAGDSASHTDKPKKSEETLREEKAKRDCLRNKDRPA
IQLYQPGARNRGGESHAGERKSERDQEKGVEG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacggcaaggaaaatactcgtcagagggagaaaaggatggagataaaatgcgaa
aacattgaaaacatggagaagccaaagcaggagaagaaagaagtaatgacgaagatcatt
atccgacgtctgcctccaagcataaccaaggaggaactggaggagcaattgcagccactt
ccagaagtggactacttagaatttttctccaatgacagcagcatgtacccccatgtcttc
gccagagcatacatcaacttcaagattcaggaagatattgtacttttcagagaccggttt
gatggatatgtgttcgttgataatggagggcaggagtatccagccattgttgaatttgct
ccttttcaaaagattgccaaaagaaggagtaagaaaaaggatgctaaaagtggaacaata
gatgaagatgctgattacaagaaattcctggagatttataatggcgacgatgaaaagttt
acatccacccctgagactctactggaggaaatagaggctaaaacaaaggaactagtagct
aagaaaatgactcccctcttggacttcttaaagaacaaacagagaatccgtgaggaaaag
aaagaggaaaggaggagacgagaactcgaacgtaagcgcctgagggacgaggaacgtcgg
aggtggagggaggaggacaggagaaagcgcaaagaagcagagaagttcaagaaaggagac
aaaccttccgagaaggataaagaccaagcgaaggaggtgccaaaaatcaagctcttgaga
aaaccagacagaggagatgatgtggagaagttaaagaaacctgagaaggacaagatgaaa
gacgacagagctccagggtgtcctgatatgacgaaacgccagaacttcgaaaccaggggg
gacagggtatcacggaaagctgatgaagatggacacaaagacttcagagagcgtgaccta
gaaagggacagaaaccgcgaacgagacaaagagagggagcggcgacagaaagagaaggag
cgcatcagacgccaagacgaggataggcgaaggaggagggaaaggcacgatggagagaac
tcctacagaaagcaagaggaagaagggaaaagggagaaagaagatcgtgtctgggaaaag
agaaggggcgagaatgccggggactccgcaagccatactgataagcctaaaaagtcagaa
gaaaccctgagggaggagaaagctaaaagagattgtttaagaaacaaggatcggcctgcc
attcagctataccagccaggtgccaggaaccgaggaggagaatctcatgctggggagcga
aagtcagagcgagaccaagagaagggagttgaaggataa
DBGET
integrated database retrieval system
