Oncorhynchus mykiss (rainbow trout): 110505300
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Entry
110505300 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110505300
04082 Neuroactive ligand signaling
110505300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110505300
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110505300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
110505300
NCBI-ProteinID:
XP_021440121
Ensembl:
ENSOMYG00000022291
LinkDB
All DBs
Position
25:8200364..8213907
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AA seq
486 aa
AA seq
DB search
MCTMQVDTVFVLFCVCLMGVAGRSAHQRGQKLETYKQSRSRRQTSRMDGETHSNSERPIL
KRSSDMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMT
LYLRHYWKDERLSFPSTNNQSMTFDSRLAKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVH
PDGNVLYSLRITVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDE
RISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSWV
SFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIE
YAAVNYLSTVQERKERKLRERLPCTCGIGNPDDMTCDPQISGYTTMDVNRTANYGTAGNY
GMPENGGRQERMLAQVVLGDPQLTGQVKRPGYVNIWIDTHAIDKYSRVLFPGSYALFNII
YWSIYS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccatgcaagtggatactgtgtttgtgctgttctgcgtctgcctcatgggggtt
gctgggagatcagctcatcaaagaggccaaaagctagagacctacaaacaaagcagatcc
aggagacaaacgtcaagaatggatggagaaactcatagcaactctgaaagaccaattcta
aagcgaagttcagacatgacaaaatctcccatgacaaaatctgagcagctcctaagaata
gatgaccatgattttaccatgagaccagcatttggaggaccccctattccagttggggta
gatgttcaggttgaaagtctggacacaatctctgaagtggatatggacttcaccatgacc
ctgtacctgcggcactactggaaagacgagcgcctgtccttccccagcaccaataaccag
agcatgaccttcgacagcaggctggccaagaagatctgggttcctgacatgttcttcgtc
cactccaagaggtccttcatccacgacacaaccacggacaacgtcatgctgagggtgcac
cctgacggaaacgtgctctacagtctaagaatcacagtcacggccatgtgcaacatggac
ctgagtcgcttccctctggacacacagacctgctcgctggagatagaaagctacgcgtac
acggacgatgacctcatgctgtactggaagaaaggcaacgagtcactgaacacggacgag
aggatatctttatctcagttcctcatccagaagttccacaccactacaaagctggccttt
tatagcagtacaggctggtacaaccgtctgtacatccacttcactctacgacgccacgtc
ttcttcttcctgctccagacctacttccctgccaccctcatggtcatgctgtcctgggtc
tccttctggattgaccgcagggctgtccccgctagggtccccttgggtatcaccacggtg
ctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagagtgtcctacatc
aaagcagtagacatctacctgtgggtcagttttgtgtttgtcttcctctcggtcatagag
tatgcagcggtcaactacctctcgaccgtgcaggaacggaaagagaggaagctaagagaa
aggttgccctgtacctgtggtattggcaacccggacgacatgacgtgcgacccccagatc
tccggctacaccaccatggacgtcaaccgcacagcgaactatggcacagcagggaactat
gggatgccagagaacggcggcaggcaggagaggatgttggcccaggtggttctgggggat
ccccagctcacgggccaggtaaagaggccaggctatgtgaacatttggatagacacccac
gccatagacaagtactcacgggtcctattccctggttcctatgccctgttcaacatcatc
tactggtctatctactcctaa
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