Oncorhynchus mykiss (rainbow trout): 110506283
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Entry
110506283 CDS
T07259
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110506283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110506283
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110506283
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
110506283
NCBI-ProteinID:
XP_036820302
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All DBs
Position
26:15716748..15731540
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AA seq
689 aa
AA seq
DB search
MQTGLLTVEDEDRPASAASYGSVNVQERVTTLVKLFKARTVRKKEKLMDPDESEEDSPQT
SPAKAPPPPPPEEDKDISAPVEEEEEEEYWDFYGYPIKILKLPKMPPLPSWLQTIVDYRF
PSSIDPYTDLVYVVWLFFVMMAWNWNVWLIPVRWAFPYQTADNIYWWLLMDYTCDLIYIT
DILVFQPRLEFVRGGDIVCDKKDMRDNYMTTERFKMDCVSMFPMEIFYYFTGVNSLLRFP
RLLKYMAFFEFNDRLEAVMKKAYIYRVILTTSYLLYSLHINACLFYWGSDYEGLGSTKWV
YNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEITFQLVNYFVGVFAFSIMIGQMRDVVG
AATAGQNYYRACMDNTIKYMTSYHIPTEVQNRVKTWYDYTWKIQGMLDEQELLIQLPDKM
RMDMAVDVNYSIVSKVALFQGCDRQMIFDMLMRLKSVVYLPGDFVCKKGEIGREMYIIKQ
GEVQVVGGPDLKTVFVTIRAGSVFGEISLLAGGGGNRRTANVMAHGFANLFILDKRDLSD
ILVHYPESQKLLRKKAKKMLTKDKKPEEKAEVKETAEVIPDRPETPKLFKAALVITEQAG
IKGTFAKLKEGYKPAETESSGLPIPPPSPMVHRRSPIPPTDAQVEDDEDAVSETTDSMML
IRMTRRHKGEELLSVEQKPGDEEEEMEKK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccggcctcctgactgtggaagatgaggatcgtccagcatcagcggcaagctat
ggcagtgtgaatgtccaagagagagtgactacactggtcaagctgtttaaggcgaggacg
gtccgcaagaaggaaaaactgatggaccctgacgaatctgaggaagacagccctcaaacc
tccccagccaaggcgccccctccccctcccccagaagaggacaaggacatctcagccccg
gtggaggaggaagaggaggaggagtactgggacttctatggatacccaatcaaaatcctc
aaacttcccaaaatgcccccacttcctagttggcttcaaaccatagtggactatcgtttc
ccttccagcatcgacccttatactgacctggtctacgtggtgtggctgttctttgtgatg
atggcgtggaactggaacgtgtggctgatcccggtgcgctgggccttcccctaccagact
gcagacaacatctactggtggctgttaatggactacacctgtgaccttatttacatcacc
gacatcctggtctttcagccccgcctggagtttgtacgcggaggagatattgtgtgtgac
aaaaaggacatgagagacaactacatgacaacagaacgattcaagatggattgtgtcagt
atgttccccatggagatattttactactttactggcgtgaactcccttctcagattcccc
cgcctactgaagtacatggctttctttgagttcaacgaccgtttggaagcagtcatgaag
aaagcctacatctacagagtgatcctgaccacttcctacctgttgtattctctccacatc
aacgcctgtctgttctattggggttctgactacgaggggctggggtccactaagtgggtc
tacaacggcaaagggaacagttatatccggtgttactactttgctgtaaagaccctgatc
accatcggtggtctcccggacccaaccaccgtgtttgagatcacattccagctcgtcaac
tattttgttggcgtctttgctttctccatcatgattggtcagatgagagatgtggtgggg
gctgccacagcgggtcagaactactaccgggcctgtatggacaacaccatcaagtacatg
acctcctaccacatccccacagaggtccagaaccgagtcaagacctggtacgactacacc
tggaaaatacagggcatgctggatgagcaggagctgttgatccagctgcctgataagatg
aggatggacatggctgtggatgttaactactccatcgtgagtaaagtggccctgttccag
ggctgtgacagacagatgatctttgacatgttgatgaggctcaagtctgtggtctacctg
cctggggactttgtctgtaaaaagggtgagatcggcagggagatgtatatcatcaagcag
ggggaggttcaggtggtgggaggacctgatttgaagactgtgtttgtgacaatcagggcc
ggctctgtgtttggagaaatcagcttgctggcagggggcggggggaacagacgcacagcc
aatgtgatggctcacggattcgcgaacctcttcatcctggataagagggacctctcagac
atcctggtgcactatcccgagtcccagaaactcctccgcaagaaggccaagaaaatgctg
acgaaggataagaagccagaggaaaaggcagaggtgaaggagactgccgaggtgatccca
gacaggccggagacccccaagctgttcaaagcagccctggtgattacagagcaggcaggc
attaagggcaccttcgccaagctgaaagagggctacaaacctgccgagactgagtcctct
ggactccccatacctcctccctccccaatggtgcaccgtcgctcccccatcccccccaca
gatgcccaggtcgaggatgacgaagatgcggtttccgagacgaccgacagcatgatgctc
atccgcatgacacgccgtcacaaaggcgaggagctcctgtccgtcgagcagaagcctgga
gatgaagaggaggagatggagaagaagtag
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