Oncorhynchus mykiss (rainbow trout): 110508244
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Entry
110508244 CDS
T07259
Name
(RefSeq) phakinin-like
KO
K10379
phakinin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110508244
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
110508244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Laminin_II
AAA_13
ATG17_like
CENP-F_leu_zip
Sec8_N
DUF7310
FKBP15
TPR
PUMA_CC
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
110508244
NCBI-ProteinID:
XP_036822752
LinkDB
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Position
28:complement(36443223..36454287)
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AA seq
439 aa
AA seq
DB search
MPLPRRRSSFLNQPAAKERPGSANTRVGTAGITNAPRGVFVGTAPTGVTSSMGTRVSRRA
LGISSVFLQGLRSTAVPVMPHGVGTGGRQYPGGAENLNSCLMEYRDKVHALEQLNQQLEE
QIKHCLDRKVSSAGAWGPLRQDWEDVYRHVSESILANARLMLQTENVQANAEDFKDRYEN
EQPFRKAMEEEISSLYKVIDDANLTKSDLESQMDSMRAELRDLACNHEEDVRVLYKQMAG
GEMDELDAPIETNLDQILAYIRSHWERVIEKNRAETDAYLECKQAESMGSKLSREEEELE
SLKTECNDAGCKIQSLQAQTESIRALKRGLENSLNDARHWHDIELQNLGSVIGKLESELG
DVHGDVEQQRRDYETLLGNKMRLELEIGTYHGILDGEESRYHPSMCTGASEPEGKQTPLP
PHSEPSGNPALQGSNTSSP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccgagacgtcgatcctccttcctgaaccaacctgctgccaaggagcgccca
ggtagtgccaacaccagggttggcaccgcaggcatcaccaatgccccccggggagtcttt
gtggggacggcccccacgggcgtcacctccagcatgggcacgcgcgtgtcacgacgagcc
ctgggcatcagcagtgtgttcctgcaggggctgaggagcacggccgtgcctgtgatgccc
cacggggtcgggaccggtggcaggcagtaccccgggggtgccgagaacctcaacagctgc
ctgatggagtacagggacaaggtgcacgccctggagcagctcaaccagcagctggaggag
cagatcaagcactgcctggatcgtaaggtgtccagcgctggagcctggggtcccctcaga
caagactgggaggatgtttacagacatgttagtgagtccatccttgccaatgccaggcta
atgctgcagacagagaatgtgcaggccaacgctgaggacttcaaggaccggtatgagaat
gaacagccgttcaggaaggcgatggaggaagagatcagctctctgtacaaggtgattgac
gacgccaacctgacgaagtcggacctggagagccagatggacagcatgagggctgagctt
cgggacttggcctgcaaccacgaggaggacgtgagggtgctctacaagcagatggcaggt
ggcgagatggacgagctggacgctcccattgagaccaatctggaccagatactggcctac
attcgctcccactgggaaagagtcatcgagaagaaccgtgccgagaccgacgcctatctg
gaatgcaagcaggcggagagtatgggcagtaaactgagccgtgaggaggaggagctggag
agtctgaagacagagtgtaatgatgctggctgtaagatccagagtctgcaggcccaaact
gagtctatcagagcactgaagcgaggtctggagaactccctgaacgacgccaggcattgg
cacgacatcgagctgcagaacctgggatccgtcatcggcaagctggagtcggagctgggt
gacgtccacggcgacgtcgaacaacagcgtcgcgactatgagacgttgctgggaaacaaa
atgcgtctggagctggaaatcggcacctaccacggcatcttggacggggaggagagccgc
taccacccctccatgtgcacaggtgcatcagagcccgaggggaaacaaactccccttcct
ccccattcagagccctctggcaacccagccctccaaggctccaacacatctagtccctag
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