Oncorhynchus mykiss (rainbow trout): 110522005
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Entry
110522005 CDS
T07259
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
omy
Oncorhynchus mykiss (rainbow trout)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
110522005
NCBI-ProteinID:
XP_021455723
Ensembl:
ENSOMYG00000000379
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Position
4:7693152..7747408
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AA seq
1215 aa
AA seq
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MSIPCSILSMNDVAWQETRGGMLHTNGAPEAGGIRVHGGGSLAAVGGAGQGPGGPHPLQG
MDRGPNPTPGTPQPPLSGRSQDDATVGYFFQRQPGEQLGGCTPSKHRWPTGDGNHIDQVR
TVDEMNYGFQALALESRGMGEMLPAKKLWDSDELSKDGRKGMLLGEEWRVNAWGSSHHSV
SQPIMVQRRPGHGFHGNGDASSVLSPRSEGGGLGVSMVEYVLSSSPGDKMDGRYRNGGYG
GVDVDTDRREKGDAQDKTSPFEEDKSPEMKVGEENDVNGRGLLNGMDRDCKDFNPTPGSR
QASPIEAVERMGPGQAGLEIMTQHQHHAQHHAMQPQNPAQNKPQQQEDFQSQETQNIGSM
DQQQGVESLQFDYAGNQIQVDSSGTPVGLFDYNSQQQLFQRSNHLTVQQLTAAQQQQYAL
AAAQQQHLAGLAPAFVPNPYIINAGPPGADPYTAAGLAAAATLAGPTVVPPQYYGVPWGV
YPANLFQQQAAAAAASHNANQQASNQGPGPGQQQVMRAGNNQRPLTPGQGQQSQQDSLAA
AAANPALAYAGMPVCLSPAHPGYQMLAPAAYYDQNGTLVMASGARGGLGGPVRLVQTPLL
INPQAAAQAAASASGSGNNMSGPQPNGLYRSMPQQQPPPQNQGLPSSSFYGTASVPASSQ
SSSLFSHTSQAPPPTSSLGFSGTGGSLGVGLGSALGGFGSSVSSSTSSSVSRRDSLLASS
DLYKRGGSSLTPIGQPFYNSLGYSSSPSPIGLTPGHSPLTPPPSLPSSHGSSSSLHLGGL
TNGSGRYISAAPGAEAKYRSAGATSSLFSSSSQLFPPSRPRYSRSDVMPSGRSRLLEDFR
NNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVF
GNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVR
ELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILE
HCTQEQTLPILEELHQHSEQLGQKYQGVSLEMTPKTYYTVSSDALFKDQYGNYVIQHVLE
HGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSA
LYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKS
GSDLGPIGGPTNGLM
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccatgcagcatcctaagtatgaatgacgtggcctggcaggagacacggggt
gggatgctgcacacaaacggtgcccctgaagctgggggcatcagagttcatggagggggt
tccctggcagctgtagggggagcagggcagggtcccggggggccacaccctctgcagggc
atggataggggccccaaccccaccccaggcaccccacagcctccactgagtgggcgctct
caggacgatgccacagttggctacttcttccagaggcaacctggtgagcagttgggaggt
tgcacccctagcaagcaccgttggcctacaggagatggcaaccacattgaccaggttcgc
actgtggatgagatgaactatggttttcaagcccttgctttggagtccaggggcatgggt
gagatgctgccagcaaagaaactgtgggattcggatgaattgtccaaggatggaaggaaa
gggatgctccttggagaggagtggagggtgaatgcctggggatcttctcatcactcagtg
tcccagcctatcatggtgcagcggcgacccggacatggtttccatgggaacggagatgct
agctctgtgctgtcccctcgctctgagggaggaggcctgggagtgagcatggtggagtac
gtcctgagctcctcccccggtgacaagatggatggccgctacaggaacggtggctatggc
ggagtggacgttgacacggacaggagggagaagggcgacgcgcaagacaagacgtctccg
ttcgaagaggacaagagccctgaaatgaaagtgggagaggagaatgatgtcaatgggaga
ggcctgctcaacggcatggacagagactgcaaagacttcaaccccaccccaggaagtcgc
caggcctccccgattgaggcggtggagaggatgggtcccggccaggccgggctggagata
atgactcagcaccagcaccacgcacagcaccacgccatgcagccccagaatccagcccag
aacaagccccagcagcaggaggacttccagagccaagaaactcagaacataggtagcatg
gatcagcagcagggtgtggagtccctccagttcgactacgctggcaaccagatccaggtg
gactcctcaggcacccccgtcggcctgtttgactacaactcccagcagcagttgttccag
cggtccaaccatctgactgtccagcagctcactgctgcccagcagcaacagtatgccctg
gctgctgcccagcaacaacaccttgccggccttgctcccgcgttcgtgcctaacccatac
atcatcaacgctggaccccccggagccgacccctacaccgctgcaggacttgccgcagca
gctacacttgccgggcctacagtggttcccccccagtactatggtgttccttggggcgtg
taccctgccaacctcttccagcaacaggcggcggctgcggctgccagtcacaacgctaac
cagcaggcatccaatcagggaccagggccgggacagcaacaggtgatgcgtgccgggaac
aaccaacgccccctcacccctggtcagggccagcaaagccagcaggactccctggcagca
gccgccgccaacccggccctcgcttatgctggtatgccagtgtgtctgtctcctgcccac
ccaggttaccagatgctggcccccgccgcctactacgatcagaacggaaccctggtgatg
gcctccggagcccgtggcggtctgggagggcctgtccgcctggtccaaaccccgcttctc
atcaaccctcaggccgcagcgcaggctgccgcttcagcgtccggctcgggcaacaacatg
tcgggccctcagcccaacggcctgtaccgctccatgccgcaacagcagcccccgccccag
aaccagggcctgccctccagctccttctatggcactgcgtcggtgccggccagctcccag
agcagctccctgttctcccacacatcccaggccccgccgcccacctcctccctgggcttt
agtggcaccggtggctccctgggcgtgggcctgggctcggcgctcggaggcttcggatca
tcagtgtcaagctctaccagcagcagcgtctctcgccgggactccctactggcaagctct
gacctgtacaagcgtggcggcagcagcctcacccccattggccagcccttctacaacagc
ctaggctattcttcctcgcccagtcccattggcctaactccgggccactccccactcaca
cccccaccctctctgccatcctctcacggatcctcctccagccttcacctgggcggcctg
acgaacggcagtgggcgctacatctcggcagcgccgggtgcggaggcaaagtatcgcagc
gcaggagccacctccagcctgttcagctccagcagccagctgttcccgccatcgcggccc
cgctacagccgctcggacgtcatgcccagcgggcgaagccgcctgctggaggacttccgc
aacaaccgcttccccaacctgcagctgcgtgacttgcccggccacatggtggagttctcc
caggaccaacacggctccaggttcatccagcagaagctggagagggccacccccgccgag
aggcagatggtgtttggggagatcctgcaggcggcctatcagctgatgaccgacgtgttt
ggcaactacgtcatccagaagttctttgagtttggcagtgcagatcagaagctggctctt
gccacccgaatccgcggccacgtgctgcccctggccttgcagatgtacggctgccgagtg
atccagaaggccctggagtccatatcctccgaccagcaggtaattagtgacattgtgcgg
gagctagacggccacgtgctaaagtgtgtgaaggatcagaacggaaaccatgtggtgcag
aagtgtatcgagtgtgtccagccccaggccctgcagttcatcattgatgccttccagggc
caggtgtttgtgctgtccacccacccttacggctgcagggtgatccagaggatcctggag
cactgcacccaggagcagaccctgcccatcctggaggagctgcaccagcactctgagcag
cttggccagaaatatcaaggcgtttcattggagatgacacccaaaacatattatacagtg
tccagcgatgcactgttcaaggatcagtacggcaactacgtcatccagcacgtcctggag
cacggcagaccagaagacaagagcaagatcgtggcagaggtccgcgggaaggtgctcctc
ctgagccagcacaaatttgcgagtaacgtggtggagaagtgtgtgatccactcatcccgt
gccgagcgggccctgctgattgacgaggtgtgctgccagaaggacggcccccacagcgcc
ctctacacaatgatgaaggatcagtacgccaactacgtggtgcagaggatgatcgacatg
gccgagcccgcccagcgcaaaatcatcatgcacaagatccgaccccacatcgccaccctg
cgcaaatatacctatggcaagcacatcctggccaagctggagaagtactacatgaagagt
ggctctgacctggggcccattggcgggcccaccaacggcctcatgtag
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