KEGG   Oncorhynchus mykiss (rainbow trout): 110522041
Entry
110522041         CDS       T07259                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit A-like
  KO
K15212  TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110522041
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     110522041
SSDB
Motif
Pfam: TAF1_subA DUF1398
Other DBs
NCBI-GeneID: 110522041
NCBI-ProteinID: XP_036830528
LinkDB
Position
Unknown
AA seq 421 aa
MSVVSLETPRETGFHKTTRNCLQHIREVLLHHRWQDAAEYMASYSQTLEDTTANMPQLYA
EIIWRIGTEILHHHPDSTLEDYNSFYERVKHSGVKHYLKVCLEHSFHLLVNGQFEDAKIQ
LSIAESWRYGKQSAGQSLXFDLIRAYSGFLDYLIWCDKKATASSTDEYDAAVNQEMHSYF
RQSSVNLKEIMKLPGVWDPFVLSYIDMLEFYNDHEGAVKVLNDYAYDDSFPPNPNAHVYL
YRYMKKQNHPLKKLLKVLKILHTLVPSHELMPEYCSLLVESENEGDLQKALGVVLDLLDY
SSWRSNLDVWNHLMNIIKRLRMKKQWLKIFAEEMGYRKDWWLAIHFSTFQARKDSAENRE
LLEVKSFVVGAFCPHYASMYCGVGKAARKGVTSDARKAKRNPKPLKNIRRLRRERGQQSQ
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtctgttgtttcattagagacaccccgtgagactggctttcacaagaccacaaggaac
tgcctccagcacatcagggaggtcttgctgcaccatagatggcaggatgccgcagagtac
atggccagttactcacagacactggaggataccaccgcaaacatgccacaactctacgct
gagatcatttggaggataggcacagagatactacaccaccatcccgactcgacgctggaa
gactacaacagtttctatgagcgagtgaaacactcaggagtaaagcattacctgaaggtc
tgtctggagcactcgttccatctcctggtcaatgggcagtttgaggatgccaagattcag
ctgtccatcgctgagagctggaggtatggcaagcagtcagccggtcagtccctttgattt
gatttgatccgggcctatagtggcttcctggattacttaatctggtgtgacaagaaagcc
actgcatccagcacagatgagtatgatgcagctgtcaaccaagaaatgcatagctacttc
cgacaatcttctgtgaacctgaaggagatcatgaagcttcctggcgtctgggatcctttt
gttctgagttacattgatatgctggaattctacaacgatcacgagggagctgtgaaggtt
ctaaatgactatgcctatgacgacagtttcccacccaaccccaatgcccatgtctaccta
taccggtacatgaagaaacagaaccacccactgaagaaacttctcaaagtgctgaagatc
ctgcatacattggtcccaagtcatgagttgatgccagaatactgttctcttctggtagag
tcggagaatgagggtgatcttcagaaggctctaggtgtggttctggatctcctggactac
tccagttggaggagcaacttggatgtctggaaccatttgatgaacatcatcaagagactg
aggatgaaaaaacaatggctgaagatttttgcagaggagatggggtacagaaaggactgg
tggctagcaatacacttctcaacattccaggccaggaaagattcggcagagaatagagag
ctactggaagtgaagagctttgttgttggagccttttgtcctcactatgcctccatgtac
tgcggtgttggtaaggcagcccgaaaaggagtgacttctgatgctcgaaaggctaagagg
aatcctaaaccgctaaaaaatataagaaggctccggagagaaaggggacagcaaagccaa
gactga

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