Oncorhynchus mykiss (rainbow trout): 110522428
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Entry
110522428 CDS
T07259
Symbol
snx9b
Name
(RefSeq) sorting nexin-9b isoform X1
KO
K17923
sorting nexin-9/18/33
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110522428 (snx9b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110522428 (snx9b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110522428 (snx9b)
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
110522428 (snx9b)
Macropinocytosis
Sorting nexins
110522428 (snx9b)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110522428 (snx9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_1
SH3_9
SH3_2
Vps5
BAR
Snx8_BAR_dom
SH3_3
Motif
Other DBs
NCBI-GeneID:
110522428
NCBI-ProteinID:
XP_036831838
Ensembl:
ENSOMYG00000027905
LinkDB
All DBs
Position
4:23324438..23357018
Genome browser
AA seq
625 aa
AA seq
DB search
MANKAQVLYDFTAEPGNNELTVREGETVTITNQGVGGGWIEAQNSRGEVGLVPEDYIELP
GGGGNVGHVAAPVAAHAPDLSFFDAFAAPANNTTQNQVDVGACSPQPDTPDTQAPPSSSS
PDEASNGKDPWSVWNQDTTGGSSNNWAAQPEGTITGTITGKSAAPDPWGSTAQSHPQAYQ
GPDIYPYPYLIDWSGAEDDEWDDEWDDVKSNSESGDGGAIQRGGATGSSMKISLNNRFPG
FSKSGPELFLLCKQPPKGKEKITIYMGEVGPVWSYPEAQLDCVVADPKKGTKMYGLKSYI
EYHVIPNTTNRPVNHRYKHFDWLYERLLDKFGSAIPIPSLPDKQVTGRFEEEFIKMRMER
LQGWMTRMCRHPVVSNSDVFQLFLTYKDEKDWKTGKRKAEKDEDVGVMIFSSIEPEAPDL
DPIEVEQKCDQFSRFTKAMDDGVKDLLTVGQEHWKRCTGPLPKEYQRIGKAFQNLSSVFT
SSGYQGEATLTDAMTSAGKTYEEIAQMVAEQPRKDLHFLMENNNEYKGLLGCFPDTIGVH
KAAIEKVKEGDRLVAASKITPQDKVTMAKRVSTMSYALQAEMNHFHSNRIYDYNRVMQLY
LEEQVKFYETIAEKLKQAHSQFTTM
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaggcacaggttttgtatgacttcactgctgagcctggaaacaacgagctg
accgtgagagagggagagacagtcactatcaccaatcagggtgttggaggaggctggata
gaagcacagaattccagaggagaggttggactagtgccagaagactacattgagctccca
ggaggagggggaaatgtaggacatgtagctgccccagtagctgcccacgccccagaccta
tcgttctttgacgccttcgctgccccagccaacaacaccactcagaaccaggtggatgtt
ggggcctgtagtcctcagccggacacccccgacacccaggcccccccttcctcctcttcc
cctgacgaggcgagtaacggtaaagacccgtggtcggtatggaaccaggacaccacggga
ggttcctccaacaactgggcggcccagccagagggcaccattacaggcaccattacaggc
aagagtgctgcccctgacccctggggctccacagcacagagccatcctcaggcctaccag
ggcccagatatctatccatatccctaccttattgactggtcaggagcggaggacgatgag
tgggatgatgagtgggatgatgtgaagtcgaactccgagtctggagatggaggggccatc
cagagaggaggggctactggctcctccatgaagatctccctcaacaacaggttccccggg
ttctccaagtctggtcctgagctgttcctcctctgcaagcaaccacccaagggaaaggag
aagataaccatctatatgggggaggttggtccagtgtggtcctatccagaggctcagctg
gactgtgtcgtagccgaccctaagaagggcaccaagatgtacggcctgaagagctacatc
gagtaccatgtcatacccaacaccacaaacagacctgtcaatcaccgatacaagcacttt
gattggctgtatgagaggctactggacaagttcggttcagccatccccatcccctctcta
ccggacaagcaggtcacagggcgttttgaggaggagtttatcaagatgaggatggagagg
ttgcagggctggatgaccaggatgtgtcggcaccctgtggtctccaacagtgacgtcttc
caactcttcctgacctacaaggacgagaaggactggaaaacagggaagagaaaagcagag
aaagacgaggatgtgggagtgatgatcttctcctccatagagcctgaagcccccgacctg
gaccccatcgaagtggagcagaagtgtgatcagttcagtcgtttcaccaaagctatggat
gatggtgtgaaggatctactcacagtgggccaggagcactggaagagatgcacaggacct
ttgcccaaagagtaccagaggattggcaaggccttccagaacctctcgtctgtcttcacc
agcagtggataccaaggagaggccaccctcaccgatgccatgacttcagcaggaaagacc
tatgaggagatagctcagatggtggctgagcagcccaggaaagacctgcacttcctcatg
gagaacaacaatgagtacaaaggccttctaggatgtttccctgacaccattggagtacac
aaggcggccatagagaaggtgaaggagggagaccggctggtggcagctagcaagatcacc
cctcaagacaaagtgaccatggctaaacgtgttagcaccatgtcatatgcactacaagct
gagatgaaccacttccatagcaaccgtatctacgactacaacagggtgatgcagctgtac
ctggaggagcaagtgaagttctacgagacgattgctgagaagctgaagcaagcacacagt
caattcaccaccatgtaa
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