Oncorhynchus mykiss (rainbow trout): 110525044 Help Entry 110525044         CDS       T07259                                  Symbol strc1 Name (RefSeq) stereocilin   KO K24636   stereocilin Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:omy03037]     110525044 (strc1) Cilium and associated proteins [BR:omy03037]  Other cilia and associated proteins   Stereociliary proteins    110525044 (strc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Stereocilin Motif Other DBs NCBI-GeneID:  110525044 NCBI-ProteinID:  XP_036836580 LinkDB All DBs Position 6:63730434..63757238 Genome browser AA seq 2024 aa AA seqDB search MLLRMQIFFALCILGMVCEAARPVRSLSRAVSRKGPADASKFDRNIEELIERIHDLSNEN HNVDANARGGISAEEILEDPNVRTGGTVLEGIDLSAYYGVLGKVFAMYRPLIEDGFIENL PKTFVCILSGRTDCGLEAELTKTVSLELGKPLLSLLSSVKSQTCTRSSTSSEPSLFQRSY LRVDDSTVEQFSVFQEIMTALSHLSLSDKVMSAWTGLIDMAFPAIVTHCSEFILTFLQTP MDYVKIALQFGIAIPALDQNEQCQQGDLKQLLMWGIRHNVSWSFGDTILDMFLTPESTLC SYPDPDCQSLPTVSFSRTLKAVEDNPTALLRCDHDNLARFNDTLCADIITVGLQSSSTLS TFCNALSILNPTEVEQVWSNTCHVIQALLLPLLEDRSDCSGDMPAAPPPGPRVSRSLSLS QLLCNYGNWTNASDVDAGLVTLCSENDRQKFILAVCSNIQLMQALMNNNPNNSWLWNFCV NSSDGYMVSQFCRYQTWTAETVDPTMVAVCWDQDKERLKILLCQNLDFFTVVFSHVDNNW LQLNCTEAPAQPDINSLVAASCQYSEWRNVMEITIEMISMCIQNDDKGFVLEVCANATFL NELLRNSATVWVGEYCTVSLNSPPTNPPVVFSIPDWCNYDKWSKVLVDPSMVELCWRHDQ MGFNKNVCCNMPLLEKLTLEPQNEWLMSVCVDKETKDILPQVCKYSDWNKPIIVDMTDLA LCAELDSLNFTQKVCANTTVLQNLLANPDNTWLLAYCANHTGPGGGGGQGGGLMGFKPVE QCQYHSWTVALPDTSLLTLCWDYDQANFVSSICTNTGLLSLLTKEPYSLWVGTLCTTYTN YTKGNSQGKSNNTSTDSQPCLVRDIVRRLNWTCTADFSSACQPGSSQTQALQLLLRCGVK ALQHRLEGLLTPHTASVVDQATSVAVVLLVALEESQMMSLRVTENIRFNVLKSVVLYLEK ETNFDNKRILLQCFGKVLTSLMQTGRLGNSDGFFLIKEYFRIPLASLRAVLGAVDITTVR QILQYFSRNQGTLQFTDDYLGTMVSVLFQTHLVRDGSLFPELVPLLSLVNPADIQSLPPL QTNLIVRNTINSNIRSLSVEQRRAFGRWYSRALSSLNMTAGGPSFIRDTGNLIVYLPFHS FQHLSPAQLLVGMDVLLMNTLSQLQQQFVADSLIRTFRNLTVEQFRRLGNLTCLSDPKDL LVYRNSEAFSVIQDNIRTCVAQGLRGPSDMISSLFLNGSELQSPGSLSAGRVSQLAPFLP WLGVDFLQKLSQSQLSPVLTALASVPFTPAQASVIVDKVSLNNSLSQPGQLQKLGSLVSG VKVETLWNLPSDILLSSLPDIALHTPGLNPPQANTITTKLWDSPEVTGWLDKVEPLLPST PLLSVLTRASLLLTNRTLAGRQAWNTQQAKTLFKEAVKTMPNLSAETFLALGSIARGVSC TALRQLFRDKPTFSSVQSVLAFMNKQSVPLHSSLKKCIIEELYYFDFFSELLGEFGAQIT LALPVSTIKKFPADMMDTLRKMIVKDSHHFLLLPSTKQDVLVDKMVQRLGMYTGEFTEDE FRSLGIMATYVVDEVFVQLVRSFFVESLEFLREFCYNSSKRDIVAQILQEPGTFGPVQNW TPETLNQVDRFLFFLPKETLQQIPQALMTQGRIERLFLSQRRWESGAVGALCIQGRDQVE QTKLFERQQFVLQNFLGFLKVGQVTPPALMPTCEKLHATQPSAWSTDSLTGMSSAAFSCS LELFGQDPFFSSYQQKLLLQKTKEIYGAARSFSSSVITQLGRIASQLSVAELSVIRLSEL STISALGAVSTWNSRQLAVLSSSVLNSTQMGPSQLASSTLVAMGHILCGIKDSDMRSLNA VEFSKAVLWLGRLRLSCSEEQQQALTGLLSHSLAFGPISSWGPEVFIEVGALAAGLPDMA MSSLVKEQIEGFTPLAVSLIRADKFAVVFDPAQISMFSYEQAKAVTEAQRLLLSPVQLTA MSMVLTVWDDKPVDFRGRSPGLALCPSPLCHLLGLLMVLLVSAL NT seq 6075 nt NT seq  +upstreamnt  +downstreamnt atgctgctaagaatgcaaatattttttgctctatgcatcctagggatggtttgcgaagcc gcaagaccagtgcgctcattgtcacgagctgtatcaagaaaaggtcccgcagacgccagc aagtttgacagaaacatagaagaattgatagagcgaatacacgatttatccaacgaaaat cacaacgttgatgccaatgccaggggcggcatcagcgcagaagaaattttagaggaccca aatgtcaggacaggtggcaccgtgttagagggcattgacttgagcgcttattatggtgtt ctgggcaaggtatttgccatgtatagaccactaatagaagatggatttatagaaaacctc cctaaaacgtttgtgtgcattttgtctgggagaacggactgtggcttggaggcagaattg acaaagactgtatcacttgagcttggcaaaccgctactgtcgcttctatcatctgtcaaa tctcagacatgcacaagaagcagtacaagttcagaaccgtcactttttcaaagatcctac ctcagagtagacgattccacagtagaacaattcagtgtttttcaggagataatgactgct ttgtcacatctttccttatctgataaagttatgtctgcttggactggtctaatagacatg gcatttcctgctatagtgacacattgttcagaattcatattgacatttctccaaacccca atggattatgtaaaaatagcactgcaatttggaattgcaattcccgctctggaccaaaat gaacaatgtcagcaaggggatctaaagcagctcctgatgtggggtatacgtcacaatgtg agctggtcctttggtgacaccatcttggacatgttcctgactccagaatcaacactgtgc agctacccagacccagactgccagagcctccccacagtctccttcagccgtaccctcaaa gcggtagaggacaaccccactgccctgctgaggtgtgaccacgacaacctagcccgtttc aacgacaccctgtgcgctgacatcatcacagtgggcctacagagctcctcaacactttcc actttctgcaacgctctgagcatcctgaaccccactgaggtggaacaggtgtggagtaac acctgtcatgttatccaggctctactgttgcccctcctggaggacaggtctgactgcagt ggggacatgccggccgcgcctcccccaggcccacgggtctcaagatcgctcagcctcagc cagctgctgtgcaactacggcaactggaccaatgctagtgacgtggacgcaggcctggtg acactgtgtagtgaaaatgacagacaaaaattcatcctagcggtgtgcagcaatatccag ctaatgcaggcattgatgaacaacaatcctaacaatagctggctgtggaatttctgtgtt aactcctctgatggatacatggtgagtcagttctgtaggtatcagacctggacggcggag acagtcgacccaaccatggtggccgtctgctgggaccaggacaaggagaggctgaagatc ctcctctgtcagaacctggacttcttcacggttgtgttttcacatgttgacaacaactgg ctgcagcttaactgtacagaggccccggcacagccagatataaactctctggtggcggct tcctgccagtactcagaatggcgaaacgtgatggaaatcaccatagagatgatatccatg tgcatccagaatgatgacaagggttttgtactggaggtgtgcgccaatgccacctttctg aatgaactgctccgtaatagtgctactgtatgggttggagaatactgcactgtctccctt aactctccacccaccaacccgcctgtggtgttcagcatcccagactggtgcaactatgat aagtggagcaaggtgctggtggacccgtcaatggtggagctctgctggcgacacgaccag atgggttttaataagaacgtgtgctgcaacatgcccctgttagagaagctcactttggag ccccagaacgagtggctcatgtctgtctgtgtcgacaaggagaccaaggacatcctgccc caggtgtgcaaatactctgactggaacaagcccatcattgtagacatgactgatctggct ctctgtgctgagctggactctctgaacttcactcagaaggtgtgcgccaacaccacggtg ctccagaacctgctagccaaccctgacaatacatggctgttggcgtattgtgcaaaccac actggccccggcggtggagggggacagggaggaggcctgatggggtttaagccagtagaa caatgccagtaccacagctggacagtggcacttcctgacacctctctcctgaccctgtgc tgggactacgatcaggccaactttgtctcatccatctgcaccaacactggcctcctctcc ctgctcaccaaggagccctacagcctgtgggtgggcacgctctgtaccacctacaccaac tacaccaaaggaaacagccagggaaaaagcaacaacacctccacagactcccagccctgc ctggtcagagacattgtgaggaggctgaactggacttgtactgcagacttcagctcagcc tgtcagccaggctccagtcagacgcaggctctgcagctgcttttgcgctgcggggtgaag gccctgcagcatcgcttggaggggctcctgaccccacacacggcctctgtggtggaccag gccaccagtgtggccgtggtgctgttggtggccctggaggagagccagatgatgtctcta cgtgtgactgaaaacatccgcttcaatgtgctcaagtctgtggtgctctatctagagaag gagaccaactttgacaacaagaggatcctgctgcagtgctttgggaaagtactgaccagt ttgatgcaaacaggaagacttgggaacagtgatggatttttcctcatcaaggagtatttc cgtatccctctggcaagtctgagggcagtgctgggtgcagtggacatcaccacagtcaga cagatactgcagtacttcagcaggaaccagggaacattgcagtttacagatgactaccta ggcaccatggtatctgtgcttttccagacccacttggtcagggacgggagcctctttcct gaactggtacccctactttccctggtcaaccctgcagacatccagtcactgcccccctta cagaccaacctcattgtgagaaataccatcaacagcaacatcaggagcctgtcggtggag caacgcagggcctttgggaggtggtacagccgagccctcagctccctcaacatgacagcc ggcggcccctccttcatcagggacactggtaacctgatagtctacctgccctttcacagc ttccagcacctctcacctgctcagctgttggttggaatggatgtgttgctgatgaacacc ctaagccaactacaacagcagtttgtggctgacagcctcataaggaccttcagaaatcta acagtggaacaattcaggaggcttggcaacctgacgtgtctgtcagacccaaaggacctg ctggtgtacagaaactcggaggccttctctgtgattcaggacaacattaggacatgtgtt gcccagggcctcaggggccccagtgacatgatctccagcttgttcctgaacgggagtgag cttcagtctcctggctctctctccgccggccgagtgtctcagctggctcccttcttgccc tggctgggtgtggacttcctgcagaagctcagccaatcccagctcagccctgtgctgaca gccctggcctctgtgcccttcactcctgcacaggccagtgtaattgtggacaaagtgtct ctaaacaacagtctgtctcagccggggcagctgcagaagctgggctctctggtgagtggg gtgaaggttgagactctgtggaacttgccctctgacatcctgctgtcctctctgcctgac atcgccctgcatacgcccggcctcaaccccccacaggccaacaccatcaccaccaaactc tgggactcaccagaggtgactggctggttggataaggtggagcccctgctccccagcacc cctctactcagtgtgctgaccagggctagtctgctgttgaccaacaggaccttggcagga agacaagcctggaacactcagcaggctaaaactctttttaaagaagcagtgaagaccatg cccaatctttccgctgagacgtttcttgcccttggaagcattgctcgaggtgtaagctgc acagccctgcgacagctcttccgggacaagccaacattttcctcagtgcagagtgtcctt gcattcatgaataagcagtctgttcctctccattcctcactgaaaaagtgcatcatcgag gagctgtactactttgacttcttctctgagctgctgggagagtttggcgctcagatcaca ctagccctgccggtgagcactattaagaagttccctgccgacatgatggacactctcagg aagatgattgtgaaggactcccatcacttcctgctcctacccagtacaaaacaggatgtt ctggtggacaagatggtgcagagacttggcatgtacacgggggagttcactgaggatgag ttccgttcactgggcatcatggcgacctatgtagtggatgaggtgtttgtgcagctggtg cggagcttctttgtggagagcctggagttcctccgagagttctgctataacagcagcaag agggacatcgtcgcacagatcctacaggagcctggcaccttcggccccgttcagaactgg acccctgagacactcaatcaagtggacagattcttattcttccttcccaaagagacgctg cagcagattccccaggccctgatgacccaggggcgtatagagaggctgtttctgagtcag cgccggtgggagtcgggtgctgttggggccctctgcattcagggccgggaccaggttgaa cagacaaagctgtttgagaggcaacagtttgttcttcagaacttcctgggttttctcaaa gtggggcaggtcacacctcctgcattgatgcccacatgtgaaaagctgcatgcaacacag ccttcagcctggagcacagacagcttgacaggcatgtcgtctgccgccttcagctgtagt ctagagctctttggccaggaccccttcttttcatcataccaacagaaactactcctccag aaaactaaagagatctatggagcggctcggtccttctcctcgtctgtgattacacagctg ggtcgtatagcctcccagctttcagtggcagagctgagtgtgatccggctgtctgagctg agcaccatctctgcactgggggcagtaagcacctggaacagcagacagctggctgtgctg tcctcctctgtgctcaactccacccagatgggtcctagtcagctggcctccagcaccctg gtggctatgggacacatactgtgtgggatcaaggactcagacatgcgctccctgaatgca gtggagttcagtaaggcagttctgtggctgggccgtctgcggctgtcctgttcagaagag caacaacaggctttaacgggactgctgagccatagcctggcttttggacccataagctcc tggggccctgaggtcttcattgaggttggagcactagcagctggcctcccagatatggcc atgtcttctttggtgaaggagcagattgaaggatttacacctctggctgtgtccctcatc cgggcagacaagtttgctgtcgtgtttgacccagcccagatcagcatgttttcctatgaa caggccaaagcggtgactgaagcccagcgcttgcttttgtcccctgtgcagctgacagct atgtctatggtgctgaccgtctgggatgacaaacctgttgacttccgtggcaggtcacca gggctggcactgtgccctagtcctctctgtcaccttctgggactgctgatggtgctgtta gtttctgctctgtaa

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