KEGG   Oncorhynchus mykiss (rainbow trout): 110528464
Entry
110528464         CDS       T07259                                 
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:omy04990]
    110528464
Domain-containing proteins not elsewhere classified [BR:omy04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   110528464
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st CFAP251_N DSE1_N Beta-prop_TEP1_C eIF2A Beta-prop_Vps41 Beta-prop_HPS5 ASA1 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_VPS8 PAC11 Beta-prop_EIPR1 NBCH_WD40 PEP5_VPS11_N Tricorn_2nd TRM82_WD RMC1_N Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 PROPPIN Beta-prop_ELP1_1st WD40_like Beta-prop_WDR11_1st DUF5711 DUF7165 Beta-prop_DCAF12 WD40_RFWD3 HPS3_N PaaA-like_N
Other DBs
NCBI-GeneID: 110528464
NCBI-ProteinID: XP_021466226
Ensembl: ENSOMYG00000014518
LinkDB
Position
7:73301265..73318546
AA seq 606 aa
MTYDLKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEIPGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNMGADVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNTGRAYIYSGSHDGHINYWDAETGENNCFS
GKGHSNLVTKMVVDEADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKDQKKVFMLDSLDYEPEAGAIHPGGSTAAVGGADGKVHLYSVQGNTLK
DEGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacctatgatttgaagcatgtatttgccagcctcccgcagatggagcgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtatgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtatgagtaccagcct
tttgggggcaaaatcaaggacatcgcctggactgaggacagtaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggt
gagatcccgggccactccaaaatcatcaacagcgtggacatcaagcagactcgcccctac
cgcctcatcaccggcagtgatgacaactgtggggccttctttgagggaccccctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtacggctggcgctgacggtcagatcttcctatacgacggaaagact
ggtgagaagcttggggctctgggcggagcgaaggcccacgaaggaggagtctatgccgtg
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctcaccaccttcaacatgggcgctgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcatatccctgtcgggctac
atcaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacagttcacaaaaacacggggagggcttacatctactctggc
agccatgacgggcacatcaattactgggatgccgagactggggagaacaactgcttctca
gggaagggccacagcaaccttgtcaccaagatggtggtggacgaggccgaccagctggtg
acttgcagcatggatgacacggtccgcttcaccagcgtgacaaagaaagaatacagtgct
tccaacctggtaaagatggatgtccagcctaaacatgtttccgtagcaacaggggggctc
acattggccgtgtgcattggacaggtggtgttgctgaaggaccagaagaaggtgttcatg
ctggacagtctggactacgagcctgaagcaggagccatccacccaggaggcagcactgcg
gcagtgggcggcgcagatggcaaggtccacttgtattctgtccaaggcaacactctgaag
gatgaggggaagagcatggaggccaaagggccagtcacagacatggcctactccaaagac
ggagcctacctggctgtcactgatgagaagaaggtcgtcacagttttcaccgtggcggat
gattactcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccccgacaatgagcactttgccagcggtggaatggacatgatggtctacgtttggaca
gtgaatgatgcagacaagaggctgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgaacacacgctagtgaccacctctcatgacgccagcatcaag
cagtggactcttaaattctga

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