Oncorhynchus mykiss (rainbow trout): 110528716
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Entry
110528716 CDS
T07259
Name
(RefSeq) high-affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110528716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110528716
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
110528716
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Gene cluster
GFIT
Motif
Pfam:
SSF
DGOK
Motif
Other DBs
NCBI-GeneID:
110528716
NCBI-ProteinID:
XP_036837982
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Position
7:complement(2543172..2554006)
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AA seq
592 aa
AA seq
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MTGIHVEGLAAIALFYVLILAVGIWAAWKNKHAGEAEGTDRSETIMVGGRDIGLFVGGFT
MTATWVGGGYINGTAEYVYLPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDP
FQQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIIDINIKMSVVISACIAIFYTL
VGGLYSVAYTDVVQLFCIFLGLWVSVPFALSNPAVSDIKISAVKEIYQAPWKGNIKREDA
WVWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVMIGAIGAS
TDWNQTAYGPVPPKERDQADMILPIVLQYLCPPFVSFFGLGAVSAAVMSSADSSILSASS
MFARNIYQLAFRQSASDTEIVWVMRVTIFVFGGLATAMALLTGTVYGLWYLSSDLVYVII
FPQLISVLFVKGTNTYGSVAAYVFGLILRIGGGEPYLSLPPFIYYPGWQIEDRIHHLTGE
VEHIVVQKFPFKTVSMLASFLGNVAFSYLAKYLFESGKLLPKYDFLDAVLAQHSIENMDK
TTLVNRNTIVLSEMAPVKPRLSVQLAATFTRRDTLAEEDSSPEDSPNHETLD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtatccacgtggagggactggcggcgatcgccctcttctacgttctgatcctt
gcggtggggatctgggcagcgtggaagaacaaacacgccggggaggcggagggcacagac
cgcagtgaaaccatcatggttggtggaagggacattggtttatttgttggtggttttacc
atgaccgcgacctgggttggtggcggatacatcaacggaacggcggagtacgtatatctt
cctggttacggcttggcttgggcacaagcgccttttggatatgcgctaagtctagtcgta
gggggtctgttcttcgccaagcccatgcgctccagaggttatgtcaccatgctggaccct
ttccagcagaagtatgggaagaggatgggtggtctgctcttcatacctgctctaatggga
gagatcttctggtcggcggccattttatctgctctgggagccacgctgagtgtgatcata
gacataaacatcaagatgtctgtggtgatctcagcctgtattgcgatcttctacacgtta
gtcggaggtctgtattctgtagcctacaccgacgtggtgcaactcttctgtatcttcctg
ggactgtgggtttcagtaccgttcgctctgagcaacccagcggtgtctgacatcaagatc
agtgcagtgaaggagatctaccaagctccctggaagggaaacatcaagagagaagacgcc
tgggtctggatagacaacttctgtctgctgatgttgggggggattccctggcaggtatat
tttcaacgggttctctctgcctcttcagctacgtacgcccaggtgctctcgttcatcgcc
gctgcagggtgcctggtcatggccgtgccctcagtaatgatcggggctataggggcctcc
acagactggaaccagacggcgtatggacctgtacctcccaaggagagggaccaggcagac
atgatattacccatagtcctccagtacctctgtcctcccttcgtctccttcttcggcctg
ggggcggtctctgctgccgtgatgtcatctgccgactcctccatcctatcagctagctcc
atgttcgctcggaacatctaccagctggctttccgccaatcggcatcggacaccgagatc
gtgtgggtgatgcgtgtcaccatctttgtgttcggcggcctggccacggcgatggcgttg
ctaacggggacggtgtacgggctgtggtacctgagctccgacctggtctacgttatcatc
ttccctcagctcatctccgttctcttcgtcaagggaaccaacacgtacggctccgttgct
gcttacgtctttggtctgatcctgaggatcggaggaggggaaccctacctttcactaccc
cccttcatctactaccccggctggcagatagaggaccggatccatcatctgactggagag
gtggaacacatcgtggtgcagaagttcccgtttaagaccgtctccatgttggcctccttc
ctgggcaacgtggctttctcctacctggccaagtatctgtttgagagcggcaagttgttg
cccaagtatgacttcctggacgcggtgttggcccagcacagcatagagaacatggacaag
accacgttggtcaaccgtaacaccatcgtgctgtctgagatggcgcctgtcaaaccacgg
ctcagcgttcaactggcggctacgttcacccgcagagacactctggctgaggaggactcg
agtcccgaagacagccccaaccacgagaccctggactaa
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