Oncorhynchus mykiss (rainbow trout): 110529197
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Entry
110529197 CDS
T07259
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110529197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110529197
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110529197
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
110529197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
Motif
Other DBs
NCBI-GeneID:
110529197
NCBI-ProteinID:
XP_036840814
LinkDB
All DBs
Position
8:18469380..18582050
Genome browser
AA seq
3016 aa
AA seq
DB search
MRAPHSSLDLAQQSVMFAVRIVTADYYLTSPLKDLDVIYNEFRESDVKKVPVVRIFGATP
IGQKTCLHLHGIFPYLYVPYDGYGQQAESYLRQVAFSIDRALNVSMGNPSSNTQHVFKVA
LVSGMPFYGYHAKEKTFMKIYLYNPQMVKRVCELLQGGAVMNKSYQPHEAHIPYLLQLFI
DYNLYGMNMVNLGAVKFRQSQQREEGSPPDHQRFCSRPLKSPCTSKLSDSSLGGTFVRWQ
EDATPCSLVLEDVEKQSTCELEADAVAADILNRLEIDNQIGRNPGLQVIWEDEKQRRREK
NQSSQVETPQSQDRRFVASTESERIFMKRFKEILKENEFDVTQSGSVEGVAEEQDPFPAE
LSVYPDVLTPEVLHCTPANQVEVHRDSQTDAKRNCGKDQGEAIVDEEAILSLLESSQTFL
SQRSSHAPLLDSSQNHAMVDLLAGLEDDGYRAAHMRQNFQHSLPGGGSAHYNSDEEEEGP
ELEREEAELSLMMSQRWDSDLSEPSSRQRPGVKDAEESFSDEPQESSDEEMERRGDNSLS
ANLSISQLDGAADENSDSLLTDKGSRTHSSLTVTDTILGKRNPFPGETVHLEPLSSTKVL
LECKHPEHRQAHSQDAEEPANKHFVVQDSHQCSTVFKVNKERPYIQPVKHPIPCNIANQA
EVSQICVDKMDVVRPLYTYEKKTMALEESDLGVFPFSNRKITQSRKKYSSMKNVEKNRLS
ILQNHRSFSLCYSELRNCPSTTDLELGQKGCKRPILRNSINPTPCPIEEDKLLAPLEGEM
GQDSEDGDMGELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLTRPAKKVVGNKL
THGCAKLEQSETRRSRLKLGKRSLAAATQKANAYAGETPASDTQVSTAFMAITPTCPKST
DAEEKPVTVAKSVVVGTGPTEPLPESPALAPTPLPAPIASPAPAPVPAILNEASVEGRLA
PLLELPAKVTCTKASGLPGSKYTLRAKRKMSYDSSEDGEQSVSSRMKHPLALRDRFKENY
VLSTQELKYQKRRKMYRKEPREPPIIIKYIIINRFKGQKNMLVKMAKVSAKEQRVVLTPD
RVETYTKMSPIKTFWPKVPQSCAVKFPLSEPKASKKHPKRKAKVNTTTKKTVNSPPRVRV
RQGDERPRRTRGLRKTLTPSLPCPWPCYCELADDHITEYTDVMVELGYRSERSLSPVDST
PPRCWSPSDPLMEAISSDRLVNRLNDPCLTSVCQEPPPESLGRGVRNRSRTAKPRNVTST
SPRRRIKLSEEVKKESTARRKSTIGTPRRRKKVLETVDGTSVGGVCTTTISTRTRRPRRK
KQAEGPEQPPVRSRDCDSSQHLFPEGELPSTESSSGDIPPFQKLASKTSQIIDGSKSLTQ
FSQSIEPKSEDCESSIMEVNQSFALEFVQMQPDQPQGCAVKADTTADEWTSQQVKSPTQV
EDRKGTPKAESPHSGLRNGKTLPEDISGLAVLKKLQQRGGQCLSTTTQPPGSTPDPAAAK
PSRARRAPSATPRKPRAPRTTNAKEGKPRSREEKANSQPEVPVKQKPPMSDGGPVFLSDP
GLDSCYSIEDSLSPELPHNYNFDINAIGIGSQAEFSSLYMGSQFVLTDKNLPQKFLSDIT
QEAVPALALSLETRPEVLFGSGEELQESLSGPLTPELFDKPKNGEFVSNHRSPLDSERLP
RSREWGTSLGKLHSLSHFQGFHCERKELLFSAFDPILPLPLSSASFADNEGLQTGDLLEG
NYAFTSTTPCSSPRSFSSLSQVKVISQLLRGTGGGAHILKPLMSPPSREEILTTLLDLEM
SEVTFQEPFYSNPSDAPGKPREVGGRKLMVETKLAKELAEFNGDLCLEGLQFWKTAFSTM
TRAGSSHTLGAEDTRDQGQLSPSSAGDQKVILVPCMSAPRRERVQLWLDARKQYEHLQRG
RRDMGELERGRLEQVREEQQTDRTEQPAPFHCSALEDEEEFEKLSGMRTRRERRNDLSLQ
TSPVGGVETQDIPRGVKPVLDINIRDSEEEYFGKSISPHLLPWQEPTQHSPSGPDAVEGE
RRGSDRGLPLSPRLCTSPERREEKHFLSPSPFPSMKPRGDGECTSPQLHSTPVLRRHKGR
DESETVCSTEGAEDAESTSQRLQHRRGEHTDTLRRVLLTTQRKNQFAALNAPKKDNSQIE
GPSISNSYGFKVSLQNLQDAKALHEVQHLTLMSMELHVRTRRDLEPDPEFDPICALFYCF
SSDAPLPDSDKTQLTGAIVVDKDCQESGQGVRGTAPLLVRSGVSGLKVTYAVNEKQMFQE
VVTVIRRFDPDILVGYEVQMRSWGYLLQRASALGVDLCQQLSRVPGNAKENHFAAERDEY
RADTMTEIHIIGRIVINLWRIMKTEVTLNNYSFENVAFHVLHQRFPLYSPRSLSDWFDHN
TDLYRWKVVDHYVSRVGGTMQLLQQHDIIGRTSELARVFGIQFYHVLTRGSQYRVESMML
RVAKPMNYIPVTPSIQQRAQQRAPQCIPLVMEPESRFYSNSVVVLDFQLLYPSIAIAYNY
CYSTCLGHVESMGTADEFKFGCTSLRVPPELLYQLRNDITVSPNGIAFVKPTVRKGVLPS
MLEEILNTRLRVKHSMKTYKQDKTLMRLLDARQLGLKLIANGYAAANCSGRMPSVEVGDS
IVHKARETLERAIKLVNDTKKWGAHVVYGDTDSMFVLLKGATKEQAFMIGNEIAEAVTAT
NPKPVELKFEKVYLPCVLQTKKRYVGYMYKSLDQKDPVFHAKGIETVHRDGCPAVSKILE
RSIKLLFETRDISLVKQFVQRQCGKVLEAKASMQDLTFAKEYRGSGSYRPGTCVPALELT
RRMMAYDRRLEPRAGERVPYVIVYGRPGVPLIQLVRRPLEVLQDPSLRLNATYYITKQIL
PPLQRIFQLIGVDVLSWYQEIPRVQKASCSTVAERKGTISQYFTTLHCPVCDELTQLGVC
TSCRGEPQRVAITLHQDMRLWESQQDQLLQICRNCSGSVERQVLCVSLDCPVLYKLSRVN
RQLSKVPYLRQLLEQF
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctccgcatagttcattggatctagcacagcagtcagtcatgtttgcggtccgt
atcgtcaccgctgactactaccttacaagtcctctcaaagatttggacgtcatttataac
gaattcagagaaagtgacgtgaagaaagtaccagtggttcggattttcggggcaactcca
ataggtcagaagacctgtctccacctccatggcatcttcccctacctctatgtcccgtac
gatggctacgggcagcaggcggagagctacctgcgtcaggtggccttcagcatcgacagg
gccctcaacgtgtccatgggaaacccctcctccaacacgcagcacgtcttcaaggtggca
ctggtctccggcatgcctttttatggataccatgccaaagagaagacgtttatgaagatc
tatctgtacaatcctcagatggtcaaaagggtgtgtgagctgttacaaggaggtgctgtg
atgaacaagagctaccagccccacgaggcccacattccttacctgctgcagctattcatc
gactacaacctgtacggcatgaacatggtcaacctgggagccgtcaagttccgccagagc
cagcagcgcgaagaggggtctcccccagatcaccagcgcttctgcagcagacccttgaag
agcccctgtacctccaaactgagtgacagttccctgggaggcacgtttgtccgctggcag
gaggatgccacaccctgttctctagtcctggaggatgtggagaaacagagtacgtgtgag
ctggaggcagatgctgtggctgcagacatcctcaaccgtctggagatagacaatcagatt
ggcaggaaccctggcctgcaggtcatctgggaggacgagaagcagagacgacgagagaag
aaccagtcatctcaggtcgagaccccacagtcacaggatcgcaggtttgtcgcctcgacg
gagagcgagagaatcttcatgaagagattcaaggagatcctgaaggaaaatgagtttgat
gtgactcagtctgggtctgtggagggcgtggcagaggagcaggatcccttcccagctgaa
ctgtctgtataccctgatgtcctgaccccagaggtgctgcattgtacaccagctaaccag
gtggaggttcacagagactctcagacagacgctaaaaggaactgtggtaaagaccagggg
gaggccattgtggatgaggaggccattctgagtctgttggaaagcagccagaccttcctc
tcccagagatccagccacgcccccttattagatagcagccagaaccatgccatggtggac
ctgctggcaggcctggaggatgatgggtacagagcagcccatatgaggcagaacttccag
cattctctgcccgggggagggagcgctcactacaacagtgacgaggaggaggaggggcca
gagctagagagggaggaggcagaactcagtctgatgatgtcacagagatgggacagcgac
ctctcagaaccgtcttctagacagagacctggtgtgaaggatgcagaggagagcttcagt
gacgagccccaggaatcctccgatgaggagatggaaaggaggggggacaactctctctct
gccaatctgtccatttctcagctggacggcgctgcggacgagaacagtgattcattgtta
acggacaaaggctccaggacccactcgtccctcaccgtcacagacacgatccttgggaag
agaaacccctttcctggggagactgtccacctggagcccctgtcctccaccaaggtcctc
ctggagtgcaaacaccctgagcataggcaggcccactcacaggacgcagaggaaccagcc
aataagcacttcgtcgtccaggacagtcaccagtgctccacggtgttcaaggtgaataaa
gagagaccttatatccagccggtcaaacaccccatcccctgtaatatcgccaaccaggct
gaggtttctcagatctgtgtggacaaaatggacgttgttcggcctttgtacacctatgag
aagaagacgatggctctggaggagtcagacctgggcgtctttccgttcagcaacaggaag
atcacccagagcaggaagaagtacagcagtatgaagaacgtcgagaagaatcgtttgtcc
atcctgcagaaccacaggagcttctccctgtgttactctgagctgaggaactgccccagc
acgacagatctagagctgggtcagaaaggctgtaaaagaccaatcctgagaaacagtata
aacccaactccctgccccatagaagaggacaagctcctggccccgttggagggcgagatg
ggccaggacagcgaagacggcgacatgggtgagctgaagatccggtacgaggactatcag
gagaacaagactgagaggaccatagtagcccagcaggaggcgcactataagtttttcccc
agtgttattctctccaactgcctaaccaggccagctaagaaggtagtgggcaacaagctg
acccatggctgtgctaagctagagcagtcagagacacgcaggtcaaggctaaagcttggc
aagaggtctttggctgctgcaacccagaaggctaatgcgtacgctggggaaaccccagcc
tctgacacccaagtcagcacagcctttatggccatcacgcctacttgtccaaagagcacg
gacgccgaggagaagccagtcacagtggcaaagtcagtcgtagtggggactggacccaca
gaaccactgccagaatcccctgccctggcccctacccctctaccagcccctatcgcttcc
cctgcaccggccccagtccctgccattctgaatgaggcgtctgtggagggcaggttggcc
ccactgcttgagctccctgctaaagtaacctgcaccaaagcctcaggtctgcctggcagc
aagtacaccctgagggccaaacgcaagatgagctacgacagcagcgaggacggggaacag
tcggtatcctctcgcatgaaacaccctctggccctccgagaccgcttcaaagaaaactac
gtcctcagcacgcaggaactaaagtaccagaaacgacggaagatgtacagaaaggagcca
agggagccgcccatcatcatcaaatatataatcatcaaccggttcaaaggtcaaaagaac
atgttggtgaagatggccaaggtgagcgctaaggagcagcgggtggtgctgacacctgac
agagtggagacgtacacaaaaatgtcccccatcaagaccttctggcctaaggttccacag
tcttgtgcggtcaagttccctctcagtgagcccaaggctagtaagaaacatcccaaacga
aaggccaaggtcaacaccaccactaagaaaacggtcaacagcccacccagagtccgagtt
aggcaaggggatgagaggcctagaaggactagaggccttagaaaaaccttgactccctct
ctgccatgcccctggccatgttactgtgaactggccgatgaccacatcactgagtacact
gatgtgatggtggagttgggttatcgatctgagagatcccttagccctgttgattcaacc
ccaccccggtgttggtcccccagtgacccccttatggaagccataagttctgatcggttg
gtgaaccgattaaatgatccctgtctcacttctgtttgtcaggaaccccccccagagtcg
ttaggccgaggcgtgcggaaccgcagccggactgctaaacctagaaatgtaacctctacc
agcccaagaagacggattaagctttcagaggaagtcaaaaaggagagcacggcgagaagg
aaaagtactattgggactccaaggaggagaaagaaagttctagaaacagttgatggaact
agtgtgggtggtgtctgtactactaccatcagcacaagaacgaggaggcctcggaggaag
aagcaggcagaagggcctgaacagccccctgtaagaagcagagactgtgacagttcccag
cacctcttcccagagggtgagctgccttctactgaatcctcctcaggggacataccaccc
tttcagaagctagcaagcaaaaccagccaaatcattgacggctctaaatccctaacccag
ttctcgcagtctattgaaccaaagtctgaggactgtgaaagctccatcatggaggtgaac
caaagctttgctcttgaattcgtccaaatgcagcccgaccaaccgcagggttgtgctgtg
aaggcagacactactgctgatgaatggacatcccaacaggttaaatccccaacccaggtg
gaggacagaaagggcacccccaaagcagagtccccccactcaggccttcggaatgggaag
accttacctgaggacatctctggcctggctgttctgaagaagctccagcagagaggcggg
cagtgcctttccactacaacacagccccctggctccacaccagaccctgctgcagccaag
ccatcaagagccaggagggctccctcagccaccccacggaaaccccgggccccaagaact
acaaatgccaaggaggggaaacccagaagcagggaggagaaggcgaactctcagccagag
gtacctgtaaagcaaaagccccccatgtcagatggcggtccagtgttcctgtcagaccca
ggcctggacagctgttactccatagaggacagcctgtccccagagctcccacacaactac
aactttgacatcaacgccattggtatcggtagccaggcagagttctccagcctgtacatg
ggcagccagtttgttctgaccgacaagaacctgcctcagaagttcctgagtgacatcacc
caggaggcggtacctgccttggcgctgagcttagagacgaggcccgaggtgctgtttggc
tcaggggaggagctccaagaaagcttgtccggacctctgactcctgaactctttgacaag
ccaaaaaatggcgaatttgtgtccaatcatcgatcacctctggactctgagaggttacca
aggagcagagagtggggaacgtctctgggcaaactccacagcctcagccacttccagggc
tttcactgtgagaggaaagagctgctgttctctgcctttgaccccatcttaccactgcct
ttgagctctgcgtctttcgcagacaacgaagggttgcagactggagacctactggagggg
aattatgcttttacatcgaccacgccctgtagttcgccacgctcctttagctctctatcc
caggtgaaggtcatcagccagctcctcagagggacaggggggggagcccacatcctcaag
cccctcatgtcccctcccagtcgggaagagatcctcaccaccctcctggacctggagatg
tctgaggtcaccttccaggagcccttctacagcaacccctcagacgccccagggaaaccc
agggaggttggtgggcgtaagctgatggtggagaccaagttggccaaggagctggctgag
ttcaacggggacctgtgcctggaggggctacagttctggaagacagccttctctaccatg
acccgggccggctcctctcacacactgggagcagaggacaccagagaccagggccagctc
agcccctcttcagccggggaccagaaggtcatcctggtgccttgcatgagtgcccccagg
cgggaacgcgtccagctatggctggatgccagaaaacagtacgagcatctgcagaggggc
aggagagacatgggagaactggagaggggaaggttggaacaggtaagagaagagcagcaa
acagacaggactgaacagcccgctccgttccattgttcagcattggaggacgaggaggag
tttgagaagctctcaggtatgaggactcggagggagaggaggaatgatctgtccctacag
acatcacctgttggaggggtggaaactcaggacattcccagaggagtgaagcctgtactg
gacattaacatcagagactctgaggaggagtactttggtaaatccatctctccacacctg
ctgccatggcaggagcccacgcagcacagtccctcaggaccagacgcagtagagggagag
aggagagggtcagatcgagggttacccctgtcccccaggctctgcacctctccagagagg
agggaggagaagcacttcctcagtccctctcccttcccttccatgaagcccaggggggac
ggggagtgtaccagcccccagctccacagcaccccagtccttaggcgacacaaaggcagg
gatgagtcggagactgtgtgcagcacagaaggtgctgaagacgcagagtccacgtctcag
agactgcagcacaggagaggggaacacacagacaccctgaggagagtgctactgaccaca
cagaggaagaaccagtttgctgctttgaacgctccaaagaaagacaactctcagatcgag
ggccccagcatcagcaattcatacggattcaaagtcagcttgcagaacctccaggacgct
aaagccctgcacgaggtgcagcacctgacgttgatgagcatggagcttcacgtgcggacc
cggcgggacctggaacccgaccccgagtttgaccccatatgtgccttattctactgcttc
agctctgacgcacctttacctgactcagacaagacccagctgactggggccatcgtggta
gacaaggactgccaggagagtggccaaggtgtcagaggaacagcacccctgctggtaaga
tcaggtgtctcaggactgaaggtcacctacgccgtgaatgagaagcagatgttccaggaa
gttgtcactgtcataagaaggtttgacccagacatcctggtgggctacgaggtccagatg
cgctcctggggctacctcctccagcgggcatcagcactcggtgtggacctgtgccagcaa
ctttcccgggtaccaggtaacgccaaagagaaccatttcgcagcagagagagacgagtat
agagcagacaccatgacagagatacacatcatcggacgtatcgtcatcaacctgtggaga
attatgaagactgaggtgacattgaacaactacagttttgagaatgtggccttccacgtc
ctgcaccagcgcttccccctgtacagcccccgctccctgtcagactggttcgaccacaac
actgacctgtacaggtggaaggtggtggaccactatgttagccgggtgggcggtaccatg
cagcttctccagcaacatgacattatcggcaggaccagcgagctggccagggtgtttggg
atccagttctatcacgtgctcaccaggggatcccagtaccgtgtggagtccatgatgctg
cgtgtggccaagcccatgaactacatccctgttacgcccagcatacaacagagagcccag
cagagggcgccacagtgcatcccgctggtcatggagcctgagtcacgcttctacagcaac
tctgtggtggtgctggacttccagttgctctacccctccatcgccatcgcctacaactac
tgctactctacctgcctgggccacgtggagagtatgggaacggccgatgagtttaagttt
ggctgcacctccctgagggttccccctgagctcctctatcaactccgcaatgacatcacc
gtctctcccaacggcatcgcctttgtcaagcccacggtgaggaagggggtcctgcccagc
atgttggaggagatactgaatacgcggctcagggtgaagcactccatgaagacctacaag
caggataagaccttgatgaggctgctggacgccaggcagctgggactcaagctcatcgcc
aacggctatgccgccgccaactgctctggacgcatgcccagcgtagaggttggtgacagt
attgtccacaaggccagggagaccctggagagagccatcaagctggtcaacgacaccaag
aaatggggagcccacgttgtgtacggggacacagacagcatgtttgtcctgctaaaggga
gcgactaaagagcaggccttcatgatcggcaacgagatcgcagaggcagtgactgctacc
aaccctaaacctgtcgagctgaagtttgagaaggtgtacctgccgtgcgtgctccagaca
aagaagcgctacgtgggctacatgtacaagagcctggaccagaaggaccccgtgttccac
gccaaggggatcgaaacagtgcaccgagacggatgccctgctgtttccaagattttggaa
cgttccatcaagctgctgtttgagacgcgggacatcagcctggtgaagcagtttgtgcag
cgtcagtgtgggaaggtgctggaggccaaggccagcatgcaggacctgaccttcgctaag
gagtacaggggcagcggctcctaccggccggggacctgcgtccctgctctggagctcacc
aggcgtatgatggcctatgaccggcgcctggagccgcgggcgggcgagagggtgccctac
gtgattgtgtacgggaggccgggtgtgcccctcatccagctggtgcggcggcccctggag
gtgctgcaggacccgagtctgcgcctcaacgccacctactacatcaccaagcagatcctg
cccccgctgcagcgcatcttccagctcatcggcgtggacgtgctcagctggtaccaggag
atccccagggtccagaaggcatcgtgctccaccgtggctgagaggaaggggaccatctcc
cagtacttcaccacgctgcactgtcctgtgtgtgacgagcttacccagttaggggtgtgt
accagctgccggggcgagccccaacgcgtggccatcactctccaccaggacatgcggctg
tgggagagccagcaagatcagctgctacagatctgtaggaactgtagtggcagtgtggag
cggcaggttctgtgtgtgtctctggactgtcctgtgctctacaagctgtcccgggtcaac
agacagctctccaaggtgccctacctccgacagctcctggagcagttctga
DBGET
integrated database retrieval system
