Oncorhynchus mykiss (rainbow trout): 110529664
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Entry
110529664 CDS
T07259
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110529664
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
Patched domain-containing proteins
110529664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
110529664
NCBI-ProteinID:
XP_021467757
Ensembl:
ENSOMYG00000019399
UniProt:
A0A8C7QUH4
LinkDB
All DBs
Position
8:24942086..24979444
Genome browser
AA seq
920 aa
AA seq
DB search
MCFIGRSWASASWIWRRMLRQMIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDIEILVAPTHSFAKVERSLANSLFPIDQSKNKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHQDKRCLLDDIITIFEDIRLA
ILSNHTFSKVPVTYPNTTLKDGRVSFIGHQLGGVAFSPNSRDQQVKFARAIQITYYLRNH
GPVVQDVIAEKWENAFCTLITRLSTLSEDLHIQSLTSFSLWRDFHQTGVLAKGEVLVSLV
LLLLAATISSSMRDCLRGKPFLGLLGVLTIAIANVTSAGIFFISDGKFNSTLLGIPFFSM
GHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIE
SVKIFCQSMCVAVLVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWF
KTMMSDGHDHVTHHEVVPYHNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGC
LQISDGSNIVNLLASNTPSVSYATTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLTTLS
HGFNKISWMDNYFQYLKVVNVSASTKSDFITILQGSFLRSPEYQHFMEDIILSKTDGDEM
EIIASRMYLVARTTEKTREEVVELLERLRPLSLINNIKFIVFNPTFVYMDRYSSSVVSPI
LTSAFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVHMDSISILCLIYT
LNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNACCFVIGMLPLVFVPSNLT
YTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREMMERERVR
EREEIECIEVRENPDHVTNV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaagctgggcatctgcaagctggatctggaggaggatgctgcgg
caaatgatacacagagggctcaaagcttctttctactggctgggcttatttgttagtagg
catccggtttttttcctcaccgttcccgcagtcttaaccataatattcggatctaccgtc
ctgagcagattcaagcccgaaacggacatcgagatactggttgccccgacacacagcttt
gctaaagtagagcggagtcttgcgaacagccttttccccattgaccagtcaaaaaacaag
ctgtattccgacctgcacacccccggcagatatggcagactgattctgctggccaagtct
gggggaaatatactggagctagccgaccaggtcctgcaggttcacaagcaggtgctggat
ttgcgggttaattacaagggattcaattacactttcgctcatctctgtgtcctgagccat
caggataagcgatgcctcttggatgatataattacgatattcgaagatatccgcttagcc
attctatcgaatcacactttttcaaaggtgcccgtgacctatccaaataccacattaaag
gatggtcgtgtgtccttcattggccaccagctgggtggagtggccttctcgcccaacagc
cgagaccagcaggtgaagtttgcccgggccatccagatcacctactaccttcgcaaccat
ggccccgtggtgcaggacgtcatcgcagagaagtgggagaatgccttctgcaccctcatc
acacgcctgtccacgctcagcgaggacctgcacatccagtctctcacctccttcagcctg
tggagggacttccaccagacgggagtgctggccaaaggggaggtgctggtcagcctagtg
ctccttctgctggcggccaccatctccagctcaatgagggactgcctgaggggaaagccc
ttcctgggtctgctgggtgtgctcacaatagccatcgctaacgtgacctccgctggcatc
ttcttcatctccgacgggaagtttaactccacgctgctggggatcccattcttctccatg
ggtcatggaaccaaaggagtgtttgagctcctggcgggctggcgaagaactcgagaaagc
cttcccttcaaggaacgcgtggcagacgccttcgccgacgtgatggtgtgctataccatg
accagttccctctatatcatcacatttggcatgggtgccagccccttcaccaacattgag
tcggtgaagatcttctgccagagcatgtgcgtggccgtcctggtcaactacttctacgtg
ttctccttctacggttcctgcttggtgttcgctggtcagctggagcagaaccgctaccac
agtgtgttctgctgtaagatcccctcagtggagtacctggaccgtcagcccacctggttc
aagaccatgatgagcgacggccatgaccatgtcacgcaccacgaggtcgtgccctaccac
aaccacttcatccagcacttcctgagggagcactacacggagtggatcaccaacacctat
gtcaagcccttcgtggtcatcctctacctgatctacgcctccttctccttcatgggatgt
ttacaaatcagtgatggatccaacattgtcaacctcctagccagcaacacgcccagtgtg
tcctatgccacgactcagcagaagtacttcagtaactacagccccgtgatcggcttctac
atctatgagcccatcgagtactggaactccacggtgcaggagcacctcacaacgctgagc
cacggcttcaacaagatctcctggatggataactactttcagtatctgaaggtggtgaat
gtgagcgcctcgaccaaaagtgatttcatcaccatcctgcagggctccttcctgcgcagc
ccggagtatcagcacttcatggaggacatcattctgtccaagacagatggggatgaaatg
gagatcatcgcgtccaggatgtacctggtggcgcggaccacggagaagacacgggaggag
gtggtggaactgctggagaggctccgccccctttcgctcatcaacaacatcaagttcatc
gtcttcaaccccaccttcgtctacatggaccgttacagctcctccgtggtctcacccatc
ctcacatcggccttcagcgtgctcaccatcctcatcctcaccttcttcctggtcatcaac
cctctggggaacttctggttgatcctgaccgtcacctccgtagagctgggggtcctgggc
ctcatgaccctctggaatgtacacatggacagcatctctatcctgtgccttatttatact
ctcaactttgccatggatcactgtgcaccccacctgtacaccttcgtactggccacggag
cacaccaggacccagtgcattaagatctcgttagaggagcacggggcggccattttgcaa
aacgcctgctgtttcgttatcgggatgttgcccttggtgtttgtgccttccaatctgacc
tacacgctgttcaagtgctccctcctcaccgcaggctgcacagtgctgcactgttttgtc
atcctgcctgtgtttctaacgttttttcccccatcaaaaaaaaggcacaagaagaaaaaa
cgggcaaaacggaaagagcgggagagggagcgggagatgatggagagggagagagtgagg
gagagggaggagatagagtgcattgaagtcagggagaaccctgatcatgtgactaacgtc
tga
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