Oncorhynchus mykiss (rainbow trout): 110535643
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Entry
110535643 CDS
T07259
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110535643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110535643
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
110535643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_GCN1
HEAT_MROH2B_C
HEAT_EF3_N
HEAT_GCN1_C
TPR_IPO5
TPR_CAND1
Vac14_Fab1_bd
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
110535643
NCBI-ProteinID:
XP_036822835
Ensembl:
ENSOMYG00000016638
UniProt:
A0A8K9UNW6
LinkDB
All DBs
Position
3:complement(6228912..6259816)
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AA seq
942 aa
AA seq
DB search
MTKCKKKKRQDDFQKVKLKVGKTKPKADNATNINFRTKGINLTEQLKKDANAPTTHRKLN
IKDLLSQLHHYSGTVKQGALVGLRELLTLHPSELDQHLSSLLSEAAAVFTDKDPNVRMSA
TRLLRFIAQSVPAERTSPFFPLLSAHLSCAMTHIETGIQEDALKVLDVLLDHYPALLAAR
PALLLTNFLELISHKSTGGGARKGQEGKGRSWALSVNPNRNVTGQQWRLTVLLRLGRFLQ
AVVEERRAEEGVACVSGDMFSVLNGQGGANAPLELNWEELTYRKGGFQVFEHSGAMPTPH
STFKLRPATEPGAGVSEGLGTGEAVRGFASTLVPLLLDVWVEASASDRSKTDSAHLLTPD
AMSLMYQVLSILQLLRKLAPQREYQDTLDVWFRSEYLGDFKQHFMKNFPYGNLDTPKQRR
KTDPKRSKQSTTIPGQTVEPLALNVLLCQVMVSMVTLSQREGQAQEPDAEWLMPLRGFVQ
ETLSSGAKLSQRHLHTLLETVWRMVITQRSRAVTEDLLQAVYVQYQQMNLNLQTRTLLLS
FYSRLYLQEHNHTHIARSRVLSLWLAALPLQLSQLGHRNPALSDRLLLSIQAAASRGNKA
LLNSLHTHACRLYDPQEGSVVLLPAESQQRLVQLLYFLPVMSQGLLANLSRCCTAGRVSA
GLAASLIRIIHLRSSLSGWSVGSQDATLRDVDYISFLFSTLTGFSSDELATLQEAGDESV
LPPSPLSPLSLYPTPLEQFTHHWDVVEEVCHCLETLGSRSQCFDVLQNGICKNLTGLAVV
PDSMAAGLLRAVARLLDLSFLPSEPLLRFLSRCCLSLLSLLLTLQQDTTSENNHKREAVW
GACVAALSSIPRLLRLVLQSLRVRDLCEEELPQLAQILSLLLQHTALRNHMLANATLLQH
IIQDLTRYCRGESKEQWMTDLLYCYSVTMATHRGNLGLRDIY
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtgcaagaagaagaagaggcaggatgacttccagaaggtcaagctgaaggtg
gggaagactaagcctaaagctgacaacgccaccaacatcaacttccgcaccaagggaatt
aacctaactgaacagctgaagaaagatgctaatgcacccaccacacaccggaagctcaac
atcaaggacctgttgtcccagctgcatcactacagtggtacagtgaaacagggagctctt
gtgggactgagggagctgctgacccttcacccctcagagttagaccaacacctctccagt
ctgctcagcgaggctgctgccgtcttcacagacaaggacccgaatgtacggatgtctgcc
acacgcctgctcaggttcatagcccagagtgtgccagcggagcggacgtctccattcttc
cctctcctctctgcccacctctcctgtgccatgacccacattgagacgggtatccaggag
gatgccctgaaagtcctcgacgttttgctggaccactatcctgccctgctggccgctcgt
cccgccctgttgctcaccaacttcctggagctgatctcacacaaaagtaccgggggcggg
gcaaggaaggggcaggaggggaaggggaggagctgggccttgtcagtcaaccctaacagg
aacgtgactggtcagcagtggagactcacagtgctgctcagactggggcgttttcttcag
gcggtagttgaggagaggcgagcggaggagggggttgcatgtgtctcaggtgacatgttc
agtgttttgaatggacaaggaggagctaacgcacctttggagctcaactgggaggagctt
acctacagaaaaggtggatttcaggtgtttgaacattcaggagccatgcccactccgcat
tccaccttcaaactcaggccggcgactgagcctggggctggggtgagtgaggggctgggc
acaggggaggctgtacggggcttcgcctccaccctggtgccccttctactagacgtctgg
gtagaggctagtgccagcgaccggagcaagactgacagtgctcatctcctcacccccgac
gccatgtcactgatgtaccaagtcctctccatactacagctgctacgcaagctggcgcca
cagagagaataccaggatacactggatgtgtggtttcgcagtgagtacctgggggatttt
aagcagcacttcatgaagaacttcccctatggaaatctggacacccctaaacaaaggcgg
aagacagaccccaagaggagtaagcagtccactacaatcccagggcagacagtggaaccc
ttggctctgaacgtgctgctctgccaggtcatggtttccatggttaccctcagccagagg
gaggggcaagcccaggagcccgatgctgagtggctgatgcctctgagagggtttgtccaa
gagactctgtccagtggggccaagctgagccaaagacacctacatacactcctggagact
gtctggagaatggtcatcacacaacgcagcagggcggtgacggaggatctgttacaggcg
gtgtatgttcagtaccagcagatgaacctgaatctgcagaccagaacactgctactttcc
ttctacagcagactgtacctacaggaacacaaccacacacacatcgccaggagtagagtg
ttgtctctgtggctggctgctctaccgctccagttgtcccagctgggccaccgtaaccct
gccctctcagacaggctcctgctctccatccaggctgctgcctcccgcgggaacaaggcc
ctgctgaactccctacatacgcatgcatgcaggctctacgacccacaggagggcagtgtg
gtattgttaccggctgaatctcagcagcgattggtccagctactctacttcctgcctgtg
atgtcacagggtctgttggccaatctgagtcgctgctgcactgcgggacgcgtctctgct
ggcctggctgcctccctcatacgcatcatacacctcaggtcctctttgagtggttggtca
gtagggtctcaggacgcgaccctgcgtgatgttgactacatcagcttcctgttctccacc
ctcacagggttttcgtctgatgagctggccaccctgcaggaggctggggatgagagcgtg
ctccctccctctcccctctcccccctcagtctctaccccacccccctggagcaattcaca
caccactgggacgtggtggaggaagtgtgccactgcttggagacgctggggtctcgttca
cagtgctttgacgtgctgcagaacggcatctgcaagaacctgactggtctggctgtggta
ccagacagtatggcagcagggttgttgagagcggtggccagactgttggacctgtccttc
ctccccagtgaacctctactgaggttcctgtcccgctgctgcctcagcctactgtctctg
ctactgaccctacagcaggacaccacctcagagaacaaccacaagagggaggcagtgtgg
ggcgcgtgtgtggcagcgctgagcagcattccccggctgttgcggttggttctgcagtcg
ttgcgagtcagggacctgtgtgaggaggagctgcctcagctggcccagatactgtccctg
ctgctgcagcacacagcgctacgcaaccacatgctggcaaacgcaactctactacaacac
attatacaggacctcacgaggtactgtcgaggtgagtccaaggagcagtggatgactgac
ctgctgtactgctacagcgtaaccatggcgactcaccggggaaacctggggctccgcgac
atctactga
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